Escherichia coli O157:H7 M1300706002 |
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Putative Escherichia coli O157:H7 M1300706002 RM systems
Ref: Kalalah,A. and Eppinger,M. unpublished
REBASE ref # 33364
Complete sequence: 5,646,088 bp
GenBank #: CP089270
REBASE acronym: Eco706002
Org_num: 53852
All begin LSI72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25350 | DUF262 domain-containing HNH endonuclease family | |||
| 25355 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco706002ORF25360P |
| 25360 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco706002ORF25360P |
| 25365 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco706002ORF25360P |
| 25370 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2395 | cell division protein DamX | |||
| 2400 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco706002DamP |
| 2405 | ribulose-phosphate 3-epimerase | |||
| 2910 | DUF2556 family protein | |||
| 2915 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco706002ORF2915P |
| 2920 | DNA-binding transcriptional regulator Fis | |||
| 7595 | DUF1382 family protein | |||
| 7600 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco706002ORF7600P |
| 7605 | regulator | |||
| 7715 | Rha family transcriptional regulator | |||
| 7720 | R | Sso1099IP (100% identity) | CTGCAG | Eco706002ORF7725P |
| 7725 | M | M.EcoSH3ORF25410P (100% identity) | CTGCAG | M.Eco706002ORF7725P |
| 7730 | LexA family transcriptional regulator | |||
| 9235 | recombination protein NinB | |||
| 9240 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco706002ORF9240P |
| 9245 | NinE family protein | |||
| 10610 | phosphohydrolase | |||
| 10615 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco706002DcmP |
| 10620 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco706002DcmP |
| 10625 | drug/metabolite exporter YedA | |||
| 14405 | DUF1367 family protein | |||
| 14410 | R | Ecos15739ORF2910P (100% identity) | Eco706002ORF14420P | |
| 14415 | 329 aa hypothetical protein | |||
| 14420 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco706002ORF14420P | |
| 14425 | 35 aa hypothetical protein | |||
| 15225 | DUF1737 domain-containing protein | |||
| 15230 | M | M.EcoNa1RORF15230P (100% identity) | M.Eco706002ORF15230P | |
| 15235 | TrmB family transcriptional regulator | |||
| 15600 | DUF1737 domain-containing protein | |||
| 15615 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco706002ORF15615P | |
| 15620 | TrmB family transcriptional regulator | |||
| 18510 | phage antirepressor Ant | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.Eco706002ORF18515P |
| 18525 | recombination protein NinB | |||
| 25585 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco706002ORF25585P |
| 25590 | DEAD/DEAH box helicase | |||
| 25620 | N-acetylneuraminic acid mutarotase | |||
| 25625 | R | Ecos1613ORF26795P (100% identity) | Eco706002ORF25625P | |
| 25630 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25370 | endoribonuclease SymE | |||
| 25375 | R | EcosPA8GmrSDP (55% identity) | Eco706002GmrDP | |
| 25380 | R | Ecos1613GmrSP (100% identity) | Eco706002GmrSP | |
| 25385 | cytoplasmic protein | |||