Escherichia coli A16EC0684 |
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Putative Escherichia coli A16EC0684 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,207,602 bp | CP088839 |
| plasmid pA16EC0684-1: | 89,422 bp | CP088840 |
| plasmid pA16EC0684-2: | 111,089 bp | CP088841 |
REBASE acronym: EcoC0684
Org_num: 53588
All begin LQQ88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19570 | type IV toxin-antitoxin system AbiEi family | |||
| 19575 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0684ORF19580P |
| 19580 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0684ORF19580P |
| 19585 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0684ORF19580P |
| 19590 | ash family protein | |||
| 21655 | restriction endonuclease | |||
| 21660 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0684ORF21660P |
| 21665 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0684ORF21660P |
| 21670 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0684ORF21660P |
| 21675 | endoribonuclease SymE | |||
| plasmid pA16EC0684-2 | ||||
| 26285 | type II toxin-antitoxin system Phd/YefM family | |||
| 26290 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0684ORF26290P | |
| 26295 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2165 | cell division protein DamX | |||
| 2170 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0684DamP |
| 2175 | ribulose-phosphate 3-epimerase | |||
| 2765 | DUF2556 family protein | |||
| 2770 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0684ORF2770P |
| 2775 | DNA-binding transcriptional regulator Fis | |||
| 7135 | DUF1382 family protein | |||
| 7140 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0684ORF7140P |
| 7145 | PerC family transcriptional regulator | |||
| 10245 | phosphohydrolase | |||
| 10250 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0684DcmP |
| 10255 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0684DcmP |
| 10260 | drug/metabolite exporter YedA | |||
| 13790 | DUF3927 family protein | |||
| 13805 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0684ORF13805P |
| 13810 | TrmB family transcriptional regulator | |||
| 16070 | helix-turn-helix domain-containing protein | |||
| 16075 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0684ORF16075P | |
| 16080 | 71 aa hypothetical protein | |||
| 19750 | phage lysis protein EssD | |||
| 19755 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0684ORF19755P | |
| 19760 | 95 aa hypothetical protein | |||
| 19795 | LexA family transcriptional regulator | |||
| 19800 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0684ORF19800P |
| 19805 | PerC family transcriptional regulator | |||
| 22970 | response regulator receiver domain | |||
| 22975 | R | EcosS3ORF15775P (100% identity) | EcoC0684ORF22980P | |
| 22980 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0684ORF22980P | |
| 22985 | conjugal transfer protein TraG N-terminal | |||
| plasmid pA16EC0684-1 | ||||
| 25530 | 101 aa hypothetical protein | |||
| 25535 | M | M.Sso866ORF27155P (100% identity) | M.EcoC0684ORF25535P | |
| 25540 | 73 aa hypothetical protein | |||
| plasmid pA16EC0684-2 | ||||
| 26350 | 103 aa hypothetical protein | |||
| 26355 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0684ORF26355P |
| 26360 | 73 aa hypothetical protein | |||