Escherichia coli B16EC0557 |
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Putative Escherichia coli B16EC0557 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,249,057 bp | CP088790 |
| plasmid pB16EC0557-2: | 95,231 bp | CP088792 |
| plasmid pB16EC0557-3: | 69,390 bp | CP088793 |
REBASE acronym: EcoC0557
Org_num: 53609
All begin LQT49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5070 | type IV toxin-antitoxin system AbiEi family | |||
| 5075 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0557ORF5080P |
| 5080 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0557ORF5080P |
| 5085 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0557ORF5080P |
| 5090 | ash family protein | |||
| 6890 | restriction endonuclease | |||
| 6895 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0557ORF6895P |
| 6900 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0557ORF6895P |
| 6905 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0557ORF6895P |
| 6910 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1385 | helix-turn-helix domain-containing protein | |||
| 1390 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0557ORF1390P | |
| 1395 | 71 aa hypothetical protein | |||
| 7230 | McrC family protein | |||
| 7235 | R | EcosS9ORF2810P (90% identity) | GGTCTC | EcoC0557ORF7240P |
| 7240 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0557ORF7240P |
| 7245 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0557ORF7240P |
| 7250 | helix-turn-helix domain-containing protein | |||
| 8535 | response regulator receiver domain | |||
| 8540 | R | EcosS3ORF15775P (100% identity) | EcoC0557ORF8545P | |
| 8545 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0557ORF8545P | |
| 8550 | conjugal transfer protein TraG N-terminal | |||
| 13000 | cell division protein DamX | |||
| 13005 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0557DamP |
| 13010 | ribulose-phosphate 3-epimerase | |||
| 13600 | DUF2556 family protein | |||
| 13605 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0557ORF13605P |
| 13610 | DNA-binding transcriptional regulator Fis | |||
| 17950 | DUF1382 family protein | |||
| 17955 | M | M.Eho218ORF16395P (100% identity) | GATC | M.EcoC0557ORF17955P |
| 17960 | PerC family transcriptional regulator | |||
| 21375 | phosphohydrolase | |||
| 21380 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0557DcmP |
| 21385 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0557DcmP |
| 21390 | drug/metabolite exporter YedA | |||
| 24905 | DUF3927 family protein | |||
| 24920 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0557ORF24920P |
| 24925 | TrmB family transcriptional regulator | |||
| plasmid pB16EC0557-2 | ||||
| 26080 | 73 aa hypothetical protein | |||
| 26085 | M | M.Sso80ORF24890P (100% identity) | M.EcoC0557ORF26085P | |
| 26090 | 103 aa hypothetical protein | |||
| plasmid pB16EC0557-3 | ||||
| 26995 | 97 aa hypothetical protein | |||
| 27000 | M | M.Ssop356ORFAP (100% identity) | M.EcoC0557ORF27000P | |
| 27005 | 73 aa hypothetical protein | |||