Escherichia coli B16EC0725 |
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Putative Escherichia coli B16EC0725 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,279,319 bp | CP088776 |
| plasmid pB16EC0725-1: | 106,218 bp | CP088777 |
| plasmid pB16EC0725-2: | 155,929 bp | CP088778 |
REBASE acronym: EcoC0725
Org_num: 53613
All begin LQT78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2755 | endoribonuclease SymE | |||
| 2760 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0725ORF2770P |
| 2765 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0725ORF2770P |
| 2770 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0725ORF2770P |
| 2775 | restriction endonuclease | |||
| 4580 | ash family protein | |||
| 4585 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0725ORF4590P |
| 4590 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0725ORF4590P |
| 4595 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0725ORF4590P |
| 4600 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1095 | conjugal transfer protein TraG N-terminal | |||
| 1100 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0725ORF1100P | |
| 1105 | R | EcosS3ORF15775P (100% identity) | EcoC0725ORF1100P | |
| 1110 | response regulator receiver domain | |||
| 2410 | helix-turn-helix domain-containing protein | |||
| 2415 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0725ORF2415P |
| 2420 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0725ORF2415P |
| 2425 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0725ORF2415P |
| 2430 | McrC family protein | |||
| 8075 | 71 aa hypothetical protein | |||
| 8080 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0725ORF8080P | |
| 8085 | helix-turn-helix domain-containing protein | |||
| 10355 | TrmB family transcriptional regulator | |||
| 10360 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0725ORF10360P |
| 10375 | DUF3927 family protein | |||
| 13350 | TrmB family transcriptional regulator | |||
| 13355 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoC0725ORF13365P |
| 13360 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcoC0725ORF13365P |
| 13365 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoC0725ORF13365P |
| 13370 | antitermination protein | |||
| 14235 | drug/metabolite exporter YedA | |||
| 14240 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0725DcmP |
| 14245 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0725DcmP |
| 14250 | phosphohydrolase | |||
| 22135 | DNA-binding transcriptional regulator Fis | |||
| 22140 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0725ORF22140P |
| 22145 | DUF2556 family protein | |||
| 22735 | ribulose-phosphate 3-epimerase | |||
| 22740 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0725DamP |
| 22745 | cell division protein DamX | |||
| plasmid pB16EC0725-1 | ||||
| 26085 | 103 aa hypothetical protein | |||
| 26090 | M | M.Sso80ORF24890P (100% identity) | M.EcoC0725ORF26090P | |
| 26095 | 73 aa hypothetical protein | |||
| plasmid pB16EC0725-2 | ||||
| 26700 | 103 aa hypothetical protein | |||
| 26705 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoC0725ORF26705P | |
| 26710 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14725 | SpnT protein | |||
| 14730 | M | M.EcosS2ORF3675P (100% identity) | M.EcoC0725ORF14730P | |
| 14735 | R | Ecost88ORF24685P (100% identity) | EcoC0725ORF14730P | |
| 14740 | shufflon system plasmid conjugative transfer | |||