Escherichia coli B16EC0986 |
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Putative Escherichia coli B16EC0986 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,932,088 bp | CP088740 |
| plasmid pB16EC0986-2: | 103,106 bp | CP088742 |
REBASE acronym: EcoC0986
Org_num: 53621
All begin LQQ75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3805 | endoribonuclease SymE | |||
| 3810 | R | EcoSF088ORF20515P (100% identity) | RTACNNNNGTG | EcoC0986ORF3820P |
| 3815 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0986ORF3820P |
| 3820 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0986ORF3820P |
| 3825 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3575 | IS21-like element ISEc12 family helper ATPase | |||
| 3580 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0986ORF3580P |
| 3585 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0986ORF3580P |
| 3590 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0986ORF3580P |
| 3595 | McrC family protein | |||
| 10590 | TrmB family transcriptional regulator | |||
| 10595 | M | M.SboBSORF1444P (100% identity) | A | M.EcoC0986ORF10595P |
| 10615 | 39 aa hypothetical protein | |||
| 14125 | drug/metabolite exporter YedA | |||
| 14130 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0986DcmP |
| 14135 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.EcoC0986DcmP |
| 14140 | phosphohydrolase | |||
| 21465 | DNA-binding transcriptional regulator Fis | |||
| 21470 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0986ORF21470P |
| 21475 | DUF2556 family protein | |||
| 22065 | ribulose-phosphate 3-epimerase | |||
| 22070 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0986DamP |
| 22075 | cell division protein DamX | |||
| plasmid pB16EC0986-2 | ||||
| 24735 | 73 aa hypothetical protein | |||
| 24740 | M | M.Sso80ORF24890P (100% identity) | M.EcoC0986ORF24740P | |
| 24745 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14310 | integrase arm-type DNA-binding domain-containing | |||
| 14315 | M | M.Sensp14178ORF9290P (100% identity) | CAAACC | M.EcoC0986ORF14315P |
| 14320 | R | Sensp14178ORF9290P (100% identity) | CAAACC | EcoC0986ORF14315P |
| 14325 | shufflon system plasmid conjugative transfer | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9690 | recombination protein NinB | |||
| 9695 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoC0986ORF9695P |
| 9700 | NinE family protein | |||