Escherichia coli B17EC0268 |
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Putative Escherichia coli B17EC0268 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
Complete sequence: 5,316,862 bp
GenBank #: CP088703
REBASE acronym: EcoEC0268
Org_num: 53632
All begin LQT50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4415 | endoribonuclease SymE | |||
| 4420 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoEC0268ORF4430P |
| 4425 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoEC0268ORF4430P |
| 4430 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoEC0268ORF4430P |
| 4435 | restriction endonuclease | |||
| 6240 | ash family protein | |||
| 6245 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoEC0268ORF6250P |
| 6250 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoEC0268ORF6250P |
| 6255 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoEC0268ORF6250P |
| 6260 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2745 | conjugal transfer protein TraG N-terminal | |||
| 2750 | M | M.EcosS3ORF15775P (100% identity) | M.EcoEC0268ORF2750P | |
| 2755 | R | EcosS3ORF15775P (100% identity) | EcoEC0268ORF2750P | |
| 2760 | response regulator receiver domain | |||
| 4060 | helix-turn-helix domain-containing protein | |||
| 4065 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoEC0268ORF4065P |
| 4070 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoEC0268ORF4065P |
| 4075 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoEC0268ORF4065P |
| 4080 | McrC family protein | |||
| 9730 | 71 aa hypothetical protein | |||
| 9735 | M | M.KpnYN1ORFGP (89% identity) | M.EcoEC0268ORF9735P | |
| 9740 | helix-turn-helix domain-containing protein | |||
| 10580 | 73 aa hypothetical protein | |||
| 10585 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoEC0268ORF10585P | |
| 10590 | 24 aa hypothetical protein | |||
| 12265 | TrmB family transcriptional regulator | |||
| 12270 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoEC0268ORF12270P |
| 12285 | DUF3927 family protein | |||
| 15285 | TrmB family transcriptional regulator | |||
| 15290 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoEC0268ORF15300P |
| 15295 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcoEC0268ORF15300P |
| 15300 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoEC0268ORF15300P |
| 15305 | antitermination protein | |||
| 16170 | drug/metabolite exporter YedA | |||
| 16175 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoEC0268DcmP |
| 16180 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoEC0268DcmP |
| 16185 | phosphohydrolase | |||
| 23945 | DNA-binding transcriptional regulator Fis | |||
| 23950 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEC0268ORF23950P |
| 23955 | DUF2556 family protein | |||
| 24545 | ribulose-phosphate 3-epimerase | |||
| 24550 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEC0268DamP |
| 24555 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4075 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 4080 | R | EcosS9McrCP (100% identity) | EcoEC0268McrCP | |
| 4085 | R | EcosS3McrBP (100% identity) | EcoEC0268McrBP | |
| 4090 | glycosyltransferase | |||