Escherichia coli B16EC1124 |
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Putative Escherichia coli B16EC1124 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,191,499 bp | CP088723 |
| plasmid pB16EC1124-1: | 107,680 bp | CP088724 |
REBASE acronym: EcoC1124
Org_num: 53626
All begin LQT30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19365 | type IV toxin-antitoxin system AbiEi family | |||
| 19370 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC1124ORF19375P |
| 19375 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC1124ORF19375P |
| 19380 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC1124ORF19375P |
| 19385 | ash family protein | |||
| 21450 | restriction endonuclease | |||
| 21455 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC1124ORF21455P |
| 21460 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC1124ORF21455P |
| 21465 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC1124ORF21455P |
| 21470 | endoribonuclease SymE | |||
| plasmid pB16EC1124-1 | ||||
| 25615 | type II toxin-antitoxin system Phd/YefM family | |||
| 25620 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC1124ORF25620P | |
| 25625 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1965 | cell division protein DamX | |||
| 1970 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1124DamP |
| 1975 | ribulose-phosphate 3-epimerase | |||
| 2565 | DUF2556 family protein | |||
| 2570 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC1124ORF2570P |
| 2575 | DNA-binding transcriptional regulator Fis | |||
| 6925 | DUF1382 family protein | |||
| 6930 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC1124ORF6930P |
| 6935 | PerC family transcriptional regulator | |||
| 10040 | phosphohydrolase | |||
| 10045 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC1124DcmP |
| 10050 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC1124DcmP |
| 10055 | drug/metabolite exporter YedA | |||
| 13585 | DUF3927 family protein | |||
| 13600 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC1124ORF13600P |
| 13605 | TrmB family transcriptional regulator | |||
| 15875 | helix-turn-helix domain-containing protein | |||
| 15880 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC1124ORF15880P | |
| 15885 | 71 aa hypothetical protein | |||
| 19545 | phage lysis protein EssD | |||
| 19550 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC1124ORF19550P | |
| 19555 | 95 aa hypothetical protein | |||
| 19590 | LexA family transcriptional regulator | |||
| 19595 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC1124ORF19595P |
| 19600 | PerC family transcriptional regulator | |||
| 22650 | response regulator receiver domain | |||
| 22655 | R | EcosS3ORF15775P (100% identity) | EcoC1124ORF22660P | |
| 22660 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC1124ORF22660P | |
| 22665 | conjugal transfer protein TraG N-terminal | |||
| plasmid pB16EC1124-1 | ||||
| 25680 | 103 aa hypothetical protein | |||
| 25685 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC1124ORF25685P |
| 25690 | 73 aa hypothetical protein | |||