Escherichia coli C16EC0593 |
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Putative Escherichia coli C16EC0593 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,998,553 bp | CP088658 |
| plasmid pC16EC0593-1: | 127,601 bp | CP088659 |
REBASE acronym: EcoC0593
Org_num: 53650
All begin LQT58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4070 | endoribonuclease SymE | |||
| 4075 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0593ORF4085P |
| 4080 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0593ORF4085P |
| 4085 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0593ORF4085P |
| 4090 | restriction endonuclease | |||
| 5870 | ash family protein | |||
| 5875 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0593ORF5880P |
| 5880 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0593ORF5880P |
| 5885 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0593ORF5880P |
| 5890 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pC16EC0593-1 | ||||
| 24900 | IS1-like element IS1A family transposase | |||
| 24905 | R | KpnKPH1ORF27575P (71% identity) | CAAYNNNNNCTGG | EcoC0593ORF24915P |
| 24910 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoC0593ORF24915P |
| 24915 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoC0593ORF24915P |
| 24920 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3705 | helix-turn-helix domain-containing protein | |||
| 3710 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0593ORF3710P |
| 3715 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0593ORF3710P |
| 3720 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0593ORF3710P |
| 3725 | McrC family protein | |||
| 9125 | 71 aa hypothetical protein | |||
| 9130 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0593ORF9130P | |
| 9135 | helix-turn-helix domain-containing protein | |||
| 11415 | TrmB family transcriptional regulator | |||
| 11420 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0593ORF11420P |
| 11435 | DUF3927 family protein | |||
| 14980 | drug/metabolite exporter YedA | |||
| 14985 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0593DcmP |
| 14990 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0593DcmP |
| 14995 | phosphohydrolase | |||
| 22050 | DNA-binding transcriptional regulator Fis | |||
| 22055 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0593ORF22055P |
| 22060 | DUF2556 family protein | |||
| 22670 | ribulose-phosphate 3-epimerase | |||
| 22675 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0593DamP |
| 22680 | cell division protein DamX | |||
| plasmid pC16EC0593-1 | ||||
| 24840 | 73 aa hypothetical protein | |||
| 24845 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0593ORF24845P |
| 24850 | 103 aa hypothetical protein | |||