Escherichia coli C17EC0083 |
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Putative Escherichia coli C17EC0083 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,356,999 bp | CP088629 |
| plasmid pC17EC0083-1: | 162,324 bp | CP088630 |
REBASE acronym: EcoC0083
Org_num: 53660
All begin LQT83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15910 | GTPase family protein | |||
| 15915 | M | M.EcosS1ORF17110P (100% identity) | M.EcoC0083ORF15915P | |
| 15920 | S | S.EcosEC2ORF13930P (100% identity) | S.EcoC0083ORF15915P | |
| 15925 | R | EcosEC2ORF13930P (100% identity) | EcoC0083ORF15915P | |
| 15930 | 75 aa hypothetical protein | |||
| 20295 | type IV toxin-antitoxin system AbiEi family | |||
| 20300 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0083ORF20305P |
| 20305 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0083ORF20305P |
| 20310 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0083ORF20305P |
| 20315 | ash family protein | |||
| 22120 | restriction endonuclease | |||
| 22125 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0083ORF22125P |
| 22130 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0083ORF22125P |
| 22135 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0083ORF22125P |
| 22140 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2500 | DUF2556 family protein | |||
| 2505 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0083ORF2505P |
| 2510 | DNA-binding transcriptional regulator Fis | |||
| 10290 | phosphohydrolase | |||
| 10295 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0083DcmP |
| 10300 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0083DcmP |
| 10305 | drug/metabolite exporter YedA | |||
| 11170 | antitermination protein | |||
| 11175 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoC0083ORF11175P |
| 11180 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoC0083ORF11175P |
| 11185 | R | R1.EcosS3ORF2905P (100% identity) | R2.EcoC0083ORF11175P | |
| 11190 | TrmB family transcriptional regulator | |||
| 14160 | DUF3927 family protein | |||
| 14175 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0083ORF14175P |
| 14180 | TrmB family transcriptional regulator | |||
| 16805 | helix-turn-helix domain-containing protein | |||
| 16810 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0083ORF16810P | |
| 16815 | 71 aa hypothetical protein | |||
| 22475 | McrC family protein | |||
| 22480 | R | EcosS9ORF2810P (33% identity) | GGTCTC | EcoC0083ORF22495AP |
| 22485 | IS3-like element ISEc52 family transposase | |||
| 22490 | R | R1.EcoS4ORF17760P (100% identity) | GGTCTC | EcoC0083ORF22495BP |
| 22495 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0083ORF22495P |
| 22500 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0083ORF22495P |
| 22505 | helix-turn-helix domain-containing protein | |||
| 23795 | response regulator receiver domain | |||
| 23800 | R | EcosS3ORF15775P (100% identity) | EcoC0083ORF23805P | |
| 23805 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0083ORF23805P | |
| 23810 | conjugal transfer protein TraG N-terminal | |||
| plasmid pC17EC0083-1 | ||||
| 26380 | 103 aa hypothetical protein | |||
| 26385 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoC0083ORF26385P | |
| 26390 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22465 | glycosyltransferase | |||
| 22470 | R | EcosS3McrBP (100% identity) | EcoC0083McrBP | |
| 22475 | R | EcosS9McrCP (100% identity) | EcoC0083McrCP | |
| 22480 | 195 aa hypothetical protein | |||