Escherichia coli C17EC0063 |
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Putative Escherichia coli C17EC0063 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,062,822 bp | CP088632 |
| plasmid pC17EC0063-1: | 146,310 bp | CP088633 |
REBASE acronym: EcoC0063
Org_num: 53659
All begin LQR25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18725 | type IV toxin-antitoxin system AbiEi family | |||
| 18730 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0063ORF18735P |
| 18735 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0063ORF18735P |
| 18740 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0063ORF18735P |
| 18745 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2550 | DUF2556 family protein | |||
| 2555 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0063ORF2555P |
| 2560 | DNA-binding transcriptional regulator Fis | |||
| 10375 | phosphohydrolase | |||
| 10380 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC0063DcmP |
| 10385 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0063DcmP |
| 10390 | drug/metabolite exporter YedA | |||
| 14575 | DUF3927 family protein | |||
| 14590 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoC0063ORF14590P |
| 14595 | TrmB family transcriptional regulator | |||
| 20660 | McrC family protein | |||
| 20665 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0063ORF20670P |
| 20670 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0063ORF20670P |
| 20675 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0063ORF20670P |
| 20680 | helix-turn-helix domain-containing protein | |||
| 20945 | 174 aa hypothetical protein | |||
| 20950 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC0063ORF20950P |
| 20955 | ATP-binding protein | |||
| 20960 | response regulator receiver domain | |||
| 20965 | R | Ecos19ORF20635P (100% identity) | EcoC0063ORF20965P | |
| 20970 | 97 aa hypothetical protein | |||
| 21940 | response regulator receiver domain | |||
| 21945 | R | EcosS3ORF15775P (100% identity) | EcoC0063ORF21950P | |
| 21950 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0063ORF21950P | |
| 21955 | conjugal transfer protein TraG N-terminal | |||
| plasmid pC17EC0063-1 | ||||
| 24815 | 103 aa hypothetical protein | |||
| 24820 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC0063ORF24820P |
| 24825 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10175 | shufflon system plasmid conjugative transfer | |||
| 10180 | R | Ecost88ORF24685P (100% identity) | EcoC0063ORF10185P | |
| 10185 | M | M.EcosS2ORF3675P (100% identity) | M.EcoC0063ORF10185P | |
| 10190 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20650 | glycosyltransferase | |||
| 20655 | R | EcosS3McrBP (100% identity) | EcoC0063McrBP | |
| 20660 | R | EcosS9McrCP (100% identity) | EcoC0063McrCP | |
| 20665 | Alw26I/Eco31I/Esp3I family type II restriction | |||