Escherichia coli D16EC0456 |
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Putative Escherichia coli D16EC0456 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,134,476 bp | CP088602 |
| plasmid pD16EC0456-2: | 346,149 bp | CP088601 |
REBASE acronym: EcoC0456
Org_num: 53687
All begin LQQ93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7960 | 184 aa hypothetical protein | |||
| 7965 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoC0456ORF7975P |
| 7970 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoC0456ORF7975P |
| 7975 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoC0456ORF7975P |
| 7980 | type II toxin-antitoxin system RelB/DinJ family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7675 | RM | EcoXDLORF21245P (100% identity) | EcoC0456ORF7675P | |
| 7680 | DEAD/DEAH box helicase | |||
| 7720 | HNH endonuclease | |||
| 7725 | R | EcoXDLORF21295P (100% identity) | EcoC0456ORF7725P | |
| 7730 | 332 aa hypothetical protein | |||
| 10075 | 341 aa hypothetical protein | |||
| 10080 | M | M.EcosE2ORF21575P (100% identity) | GGCC | M.EcoC0456ORF10080P |
| 10085 | 68 aa hypothetical protein | |||
| 13245 | cell division protein DamX | |||
| 13250 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0456DamP |
| 13255 | ribulose-phosphate 3-epimerase | |||
| 13775 | DUF2556 family protein | |||
| 13780 | M | M.Ecost20ORFAP (100% identity) | ATGCAT | M.EcoC0456ORF13780P |
| 13785 | DNA-binding transcriptional regulator Fis | |||
| 25950 | drug/metabolite exporter YedA | |||
| 25955 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC0456DcmP |
| 25960 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC0456DcmP |
| 25965 | HD domain-containing protein | |||
| plasmid pD16EC0456-2 | ||||
| 940 | 284 aa hypothetical protein | |||
| 945 | M | M.Ssp15303ORFEP (95% identity) | M.EcoC0456ORF945P | |
| 950 | DNA-binding protein | |||
| 1070 | 202 aa hypothetical protein | |||
| 1075 | M | M.Ssp15303ORFDP (100% identity) | M.EcoC0456ORF1075P | |
| 1080 | 106 aa hypothetical protein | |||
| 1620 | IS1 family transposase | |||
| 1625 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoC0456ORF1625P |
| 1630 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoC0456ORF1625P |
| 1635 | EAL domain-containing protein | |||
| 1830 | 55 aa hypothetical protein | |||
| 1835 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoC0456ORF1835P |
| 1840 | thermonuclease family protein | |||