Escherichia coli D17EC0246 |
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Putative Escherichia coli D17EC0246 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,952,410 bp | CP088584 |
| plasmid pD17EC0246-2: | 58,866 bp | CP088586 |
| plasmid pD17EC0246-7: | 87,822 bp | CP088591 |
REBASE acronym: EcoC0246
Org_num: 53694
All begin LQT29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3320 | endoribonuclease SymE | |||
| 3325 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoC0246ORF3330P |
| 3330 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoC0246ORF3330P |
| 3335 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoC0246ORF3330P |
| 3340 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13885 | drug/metabolite exporter YedA | |||
| 13890 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC0246DcmP |
| 13895 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC0246DcmP |
| 13900 | HD domain-containing protein | |||
| 21075 | DNA-binding transcriptional regulator Fis | |||
| 21080 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoC0246ORF21080P |
| 21085 | DUF2556 family protein | |||
| 21605 | ribulose-phosphate 3-epimerase | |||
| 21610 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0246DamP |
| 21615 | cell division protein DamX | |||
| plasmid pD17EC0246-2 | ||||
| 24315 | 73 aa hypothetical protein | |||
| 24320 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC0246ORF24320P |
| 24325 | 103 aa hypothetical protein | |||
| plasmid pD17EC0246-7 | ||||
| 26115 | 101 aa hypothetical protein | |||
| 26120 | M | M.SsoST152ORF25555P (100% identity) | M.EcoC0246ORF26120P | |
| 26125 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3335 | type I restriction-modification system | |||
| 3340 | R | EcosS1MrrP (100% identity) | EcoC0246MrrP | |
| 3345 | GTPase | |||