Escherichia coli E16EC0316 |
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Putative Escherichia coli E16EC0316 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,199,294 bp | CP088560 |
| plasmid pE16EC0316-1: | 107,774 bp | CP088561 |
| plasmid pE16EC0316-2: | 75,538 bp | CP088562 |
REBASE acronym: EcoC0316
Org_num: 53717
All begin LQQ69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19605 | type IV toxin-antitoxin system AbiEi family | |||
| 19610 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0316ORF19615P |
| 19615 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0316ORF19615P |
| 19620 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0316ORF19615P |
| 19625 | ash family protein | |||
| 21690 | restriction endonuclease | |||
| 21695 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0316ORF21695P |
| 21700 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0316ORF21695P |
| 21705 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0316ORF21695P |
| 21710 | endoribonuclease SymE | |||
| plasmid pE16EC0316-1 | ||||
| 26115 | type II toxin-antitoxin system Phd/YefM family | |||
| 26120 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0316ORF26120P | |
| 26125 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2165 | cell division protein DamX | |||
| 2170 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0316DamP |
| 2175 | ribulose-phosphate 3-epimerase | |||
| 2765 | DUF2556 family protein | |||
| 2770 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0316ORF2770P |
| 2775 | DNA-binding transcriptional regulator Fis | |||
| 7135 | DUF1382 family protein | |||
| 7140 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0316ORF7140P |
| 7145 | PerC family transcriptional regulator | |||
| 10270 | phosphohydrolase | |||
| 10275 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0316DcmP |
| 10280 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0316DcmP |
| 10285 | drug/metabolite exporter YedA | |||
| 13810 | DUF3927 family protein | |||
| 13825 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0316ORF13825P |
| 13830 | TrmB family transcriptional regulator | |||
| 16115 | helix-turn-helix domain-containing protein | |||
| 16120 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0316ORF16120P | |
| 16125 | 71 aa hypothetical protein | |||
| 19785 | phage lysis protein EssD | |||
| 19790 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0316ORF19790P | |
| 19795 | 95 aa hypothetical protein | |||
| 19830 | LexA family transcriptional regulator | |||
| 19835 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0316ORF19835P |
| 19840 | PerC family transcriptional regulator | |||
| 22990 | response regulator receiver domain | |||
| 22995 | R | EcosS3ORF15775P (100% identity) | EcoC0316ORF22995P | |
| 23000 | DNA cytosine methyltransferase | |||
| plasmid pE16EC0316-1 | ||||
| 25525 | 103 aa hypothetical protein | |||
| 25530 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0316ORF25530P |
| 25535 | 73 aa hypothetical protein | |||
| plasmid pE16EC0316-2 | ||||
| 26340 | phage holin family protein | |||
| 26345 | M | M.EcoPnTigORFFP (95% identity) | M.EcoC0316ORF26345P | |
| 26350 | 75 aa hypothetical protein | |||