Escherichia coli E16EC0286 |
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Putative Escherichia coli E16EC0286 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
Complete sequence: 5,054,499 bp
GenBank #: CP088564
REBASE acronym: EcoC0286
Org_num: 53716
All begin LQT42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19765 | ash family protein | |||
| 19770 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0286ORF19775P |
| 19775 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0286ORF19775P |
| 19780 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0286ORF19775P |
| 19785 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3750 | drug/metabolite exporter YedA | |||
| 3755 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0286DcmP |
| 3760 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC0286DcmP |
| 3765 | phosphohydrolase | |||
| 11460 | DNA-binding transcriptional regulator Fis | |||
| 11465 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0286ORF11465P |
| 11470 | DUF2556 family protein | |||
| 12080 | ribulose-phosphate 3-epimerase | |||
| 12085 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0286DamP |
| 12090 | cell division protein DamX | |||
| 16555 | conjugal transfer protein TraG N-terminal | |||
| 16560 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0286ORF16560P | |
| 16565 | R | EcosS3ORF15775P (100% identity) | EcoC0286ORF16560P | |
| 16570 | response regulator receiver domain | |||
| 17540 | 97 aa hypothetical protein | |||
| 17545 | R | Ecos19ORF20635P (100% identity) | EcoC0286ORF17545P | |
| 17550 | response regulator receiver domain | |||
| 17555 | ATP-binding protein | |||
| 17560 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC0286ORF17560P |
| 17565 | 174 aa hypothetical protein | |||
| 17830 | helix-turn-helix domain-containing protein | |||
| 17835 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0286ORF17835P |
| 17840 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0286ORF17835P |
| 17845 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0286ORF17835P |
| 17850 | McrC family protein | |||
| 23990 | TrmB family transcriptional regulator | |||
| 23995 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoC0286ORF23995P |
| 24010 | DUF3927 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3950 | SpnT protein | |||
| 3955 | M | M.EcosS2ORF3675P (100% identity) | M.EcoC0286ORF3955P | |
| 3960 | R | Ecost88ORF24685P (100% identity) | EcoC0286ORF3955P | |
| 3965 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17845 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 17850 | R | EcosS9McrCP (100% identity) | EcoC0286McrCP | |
| 17855 | R | EcosS3McrBP (100% identity) | EcoC0286McrBP | |
| 17860 | glycosyltransferase | |||