Escherichia coli E16EC0387 |
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Putative Escherichia coli E16EC0387 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,216,855 bp | CP088553 |
| plasmid pE16EC0387-1: | 103,546 bp | CP088554 |
REBASE acronym: EcoEC0387
Org_num: 53719
All begin LQT37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20265 | type IV toxin-antitoxin system AbiEi family | |||
| 20270 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoEC0387ORF20275P |
| 20275 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoEC0387ORF20275P |
| 20280 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoEC0387ORF20275P |
| 20285 | ash family protein | |||
| 22355 | restriction endonuclease | |||
| 22360 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoEC0387ORF22360P |
| 22365 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoEC0387ORF22360P |
| 22370 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoEC0387ORF22360P |
| 22375 | endoribonuclease SymE | |||
| plasmid pE16EC0387-1 | ||||
| 26135 | IS1-like element IS1A family transposase | |||
| 26140 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoEC0387ORF26140P | |
| 26145 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3130 | DUF2556 family protein | |||
| 3135 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEC0387ORF3135P |
| 3140 | DNA-binding transcriptional regulator Fis | |||
| 7495 | DUF1382 family protein | |||
| 7500 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoEC0387ORF7500P |
| 7505 | PerC family transcriptional regulator | |||
| 10945 | phosphohydrolase | |||
| 10950 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoEC0387DcmP |
| 10955 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoEC0387DcmP |
| 10960 | drug/metabolite exporter YedA | |||
| 14485 | DUF3927 family protein | |||
| 14500 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoEC0387ORF14500P |
| 14505 | TrmB family transcriptional regulator | |||
| 16765 | helix-turn-helix domain-containing protein | |||
| 16770 | M | M.KpnYN1ORFGP (89% identity) | M.EcoEC0387ORF16770P | |
| 16775 | 71 aa hypothetical protein | |||
| 20445 | phage lysis protein EssD | |||
| 20450 | M | M.Sso63633ORF22290P (100% identity) | M.EcoEC0387ORF20450P | |
| 20455 | 95 aa hypothetical protein | |||
| 20490 | LexA family transcriptional regulator | |||
| 20495 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoEC0387ORF20495P |
| 20500 | PerC family transcriptional regulator | |||
| 23675 | response regulator receiver domain | |||
| 23680 | R | EcosS3ORF15775P (100% identity) | EcoEC0387ORF23685P | |
| 23685 | M | M.EcosS3ORF15775P (100% identity) | M.EcoEC0387ORF23685P | |
| 23690 | conjugal transfer protein TraG N-terminal | |||
| plasmid pE16EC0387-1 | ||||
| 26070 | 73 aa hypothetical protein | |||
| 26075 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoEC0387ORF26075P |
| 26080 | 103 aa hypothetical protein | |||