Escherichia coli E16EC0715 |
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Putative Escherichia coli E16EC0715 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,504,192 bp | CP088520 |
| plasmid pE16EC0715-2: | 123,373 bp | CP088522 |
| plasmid pE16EC0715-3: | 121,329 bp | CP088523 |
REBASE acronym: EcoC0715
Org_num: 53727
All begin LQQ60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pE16EC0715-3 | ||||
| 23530 | M48 family metallopeptidase | |||
| 23535 | R | SenSMo01ORF8345P (99% identity) | TCAGNNNNNNTGC | EcoC0715ORF23550P |
| 23540 | YecA family protein | |||
| 23545 | S | S.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | S.EcoC0715ORF23550P |
| 23550 | M | M.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | M.EcoC0715ORF23550P |
| 23555 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2665 | 100 aa hypothetical protein | |||
| 2670 | R | EcoW619ORFAP (96% identity) | EcoC0715ORF2670P | |
| 2675 | HNH endonuclease | |||
| 7415 | TraR/DksA family transcriptional regulator | |||
| 7420 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoC0715ORF7420P |
| 7425 | replication endonuclease | |||
| 12965 | drug/metabolite exporter YedA | |||
| 12970 | V | V.SflSTLE1DcmP (100% identity) | V.EcoC0715DcmP | |
| 12975 | M | M.Eco2097DcmP (100% identity) | CCWGG | M.EcoC0715DcmP |
| 12980 | phosphohydrolase | |||
| 19305 | DNA-binding transcriptional regulator Fis | |||
| 19310 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC0715ORF19310P |
| 19315 | DUF2556 family protein | |||
| 19860 | ribulose-phosphate 3-epimerase | |||
| 19865 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0715DamP |
| 19870 | cell division protein DamX | |||
| plasmid pE16EC0715-2 | ||||
| 22975 | 73 aa hypothetical protein | |||
| 22980 | M | M.Sso866ORF27155P (100% identity) | M.EcoC0715ORF22980P | |
| 22985 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2650 | SNF2-related protein | |||
| 2655 | M | M.EcoXH990ORF24545P (100% identity) | M.EcoC0715ORF2655P | |
| 2660 | R | Ecos19ORF20250P (100% identity) | EcoC0715ORF2655P | |
| 2665 | 100 aa hypothetical protein | |||