Escherichia coli E17EC0085 |
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Putative Escherichia coli E17EC0085 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,989,000 bp | CP088486 |
| plasmid pE17EC0085-1: | 139,847 bp | CP088487 |
| plasmid pE17EC0085-3: | 96,188 bp | CP088489 |
REBASE acronym: EcoC0085
Org_num: 53740
All begin LQQ95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12385 | endoribonuclease SymE | |||
| 12390 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoC0085ORF12395P |
| 12395 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoC0085ORF12395P |
| 12400 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoC0085ORF12395P |
| 12405 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6515 | DNA-binding transcriptional regulator Fis | |||
| 6520 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoC0085ORF6520P |
| 6525 | DUF2556 family protein | |||
| 19400 | recombination protein NinB | |||
| 19405 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoC0085ORF19405P |
| 19410 | NinE family protein | |||
| 23705 | drug/metabolite exporter YedA | |||
| 23710 | V | V.Fnu048DcmP (100% identity) | V.EcoC0085DcmP | |
| 23715 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoC0085DcmP |
| 23720 | phosphohydrolase | |||
| plasmid pE17EC0085-1 | ||||
| 23980 | 73 aa hypothetical protein | |||
| 23985 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0085ORF23985P |
| 23990 | 103 aa hypothetical protein | |||
| 24365 | IS1 family transposase | |||
| 24370 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoC0085ORF24370P |
| 24375 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoC0085ORF24370P |
| 24380 | EAL domain-containing protein | |||
| plasmid pE17EC0085-3 | ||||
| 25110 | 73 aa hypothetical protein | |||
| 25115 | M | M.Sso866ORF27155P (100% identity) | M.EcoC0085ORF25115P | |
| 25120 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12375 | R | SenHNK130McrCP (100% identity) | EcoC0085McrCP | |
| 12380 | R | SenHNK130McrBP (100% identity) | EcoC0085McrBP | |
| 12385 | endoribonuclease SymE | |||
| 12400 | type I restriction-modification system | |||
| 12405 | R | Ssp28760MrrP (100% identity) | EcoC0085MrrP | |
| 12410 | GTPase | |||