Escherichia coli F16EC0267 |
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Putative Escherichia coli F16EC0267 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,065,051 bp | CP088421 |
| plasmid pF16EC0267-1: | 97,218 bp | CP088422 |
| plasmid pF16EC0267-2: | 285,357 bp | CP088423 |
| plasmid pF16EC0267-5: | 91,523 bp | CP088426 |
REBASE acronym: EcoEC0267
Org_num: 53777
All begin LQQ62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21070 | adenine/cytosine-specific restriction | |||
| 21075 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoEC0267ORF21080P |
| 21080 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.EcoEC0267ORF21080P |
| 21085 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoEC0267ORF21080P |
| 21090 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2615 | DUF2556 family protein | |||
| 2620 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEC0267ORF2620P |
| 2625 | DNA-binding transcriptional regulator Fis | |||
| 6245 | PerC family transcriptional regulator | |||
| 6250 | M | M.Ecoppa1ORF22275P (100% identity) | GATC | M.EcoEC0267ORF6250P |
| 6255 | LexA family transcriptional regulator | |||
| 10695 | phosphohydrolase | |||
| 10700 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.EcoEC0267DcmP |
| 10705 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoEC0267DcmP |
| 10710 | drug/metabolite exporter YedA | |||
| 13965 | 39 aa hypothetical protein | |||
| 13985 | M | M.SboBSORF1444P (100% identity) | A | M.EcoEC0267ORF13985P |
| 13990 | TrmB family transcriptional regulator | |||
| 17985 | LexA family transcriptional regulator | |||
| 17990 | M | M.EcosEC8ORF20220P (100% identity) | GATC | M.EcoEC0267ORF17990P |
| 17995 | PerC family transcriptional regulator | |||
| plasmid pF16EC0267-1 | ||||
| 24835 | tellurite/colicin resistance protein | |||
| 24850 | M | M.Ecos131ORF21080P (100% identity) | M.EcoEC0267ORF24850P | |
| 24855 | recombination-associated protein RdgC | |||
| plasmid pF16EC0267-2 | ||||
| 25685 | 284 aa hypothetical protein | |||
| 25690 | M | M.Ssp15303ORFEP (95% identity) | M.EcoEC0267ORF25690P | |
| 25695 | 305 aa hypothetical protein | |||
| 25820 | 202 aa hypothetical protein | |||
| 25825 | M | M.Ssp15303ORFDP (100% identity) | M.EcoEC0267ORF25825P | |
| 25830 | 106 aa hypothetical protein | |||
| 26360 | thermonuclease family protein | |||
| 26365 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoEC0267ORF26365P |
| 26370 | 55 aa hypothetical protein | |||
| plasmid pF16EC0267-5 | ||||
| 27750 | 103 aa hypothetical protein | |||
| 27755 | M | M.SflC32ORFDP (100% identity) | SAY | M.EcoEC0267ORF27755P |
| 27760 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6445 | recombinase family protein | |||
| 6450 | R | EspFAAGmrSDP (100% identity) | EcoEC0267GmrSDP | |
| 6455 | DinI-like family protein | |||
| 21065 | GTPase | |||
| 21070 | R | EcosS1MrrP (100% identity) | EcoEC0267MrrP | |
| 21075 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14900 | NinE family protein | |||
| 14905 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoEC0267ORF14905P |
| 14910 | recombination protein NinB | |||