Escherichia coli F16EC0618 |
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Putative Escherichia coli F16EC0618 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,106,364 bp | CP088370 |
| plasmid pF16EC0618-1: | 87,823 bp | CP088371 |
| plasmid pF16EC0618-3: | 132,415 bp | CP088373 |
REBASE acronym: EcoEC0618
Org_num: 53792
All begin LQR16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20855 | type IV toxin-antitoxin system AbiEi family | |||
| 20860 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoEC0618ORF20865P |
| 20865 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoEC0618ORF20865P |
| 20870 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoEC0618ORF20865P |
| 20875 | ash family protein | |||
| 22675 | restriction endonuclease | |||
| 22680 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoEC0618ORF22680P |
| 22685 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoEC0618ORF22680P |
| 22690 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoEC0618ORF22680P |
| 22695 | endoribonuclease SymE | |||
| plasmid pF16EC0618-3 | ||||
| 26510 | type II toxin-antitoxin system Phd/YefM family | |||
| 26515 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoEC0618ORF26515P |
| 26520 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoEC0618ORF26515P |
| 26525 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoEC0618ORF26515P |
| 26530 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3975 | DUF2556 family protein | |||
| 3980 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEC0618ORF3980P |
| 3985 | DNA-binding transcriptional regulator Fis | |||
| 11520 | phosphohydrolase | |||
| 11525 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoEC0618DcmP |
| 11530 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoEC0618DcmP |
| 11535 | drug/metabolite exporter YedA | |||
| 15075 | DUF3927 family protein | |||
| 15090 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoEC0618ORF15090P |
| 15095 | TrmB family transcriptional regulator | |||
| 17350 | helix-turn-helix domain-containing protein | |||
| 17355 | M | M.KpnYN1ORFGP (89% identity) | M.EcoEC0618ORF17355P | |
| 17360 | 71 aa hypothetical protein | |||
| 23025 | McrC family protein | |||
| 23030 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoEC0618ORF23035P |
| 23035 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoEC0618ORF23035P |
| 23040 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoEC0618ORF23035P |
| 23045 | helix-turn-helix domain-containing protein | |||
| plasmid pF16EC0618-1 | ||||
| 25135 | 73 aa hypothetical protein | |||
| 25140 | M | M.Xca80ORFEP (100% identity) | M.EcoEC0618ORF25140P | |
| 25145 | 101 aa hypothetical protein | |||
| plasmid pF16EC0618-3 | ||||
| 26580 | 103 aa hypothetical protein | |||
| 26585 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoEC0618ORF26585P |
| 26590 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23015 | glycosyltransferase | |||
| 23020 | R | EcosS3McrBP (100% identity) | EcoEC0618McrBP | |
| 23025 | R | EcosS9McrCP (100% identity) | EcoEC0618McrCP | |
| 23030 | Alw26I/Eco31I/Esp3I family type II restriction | |||