Sulfitobacter pseudonitzschiae SC1-32 |
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Putative Sulfitobacter pseudonitzschiae SC1-32 RM systems
Ref: Qu,L. et al. unpublished
REBASE ref # 32465
| Sequence length: | GenBank #: | |
| Chromosome: | 3,850,686 bp | CP086919 |
| plasmid P1: | 37,726 bp | CP086920 |
| plasmid P10: | 35,836 bp | CP086929 |
| plasmid P4: | 97,226 bp | CP086923 |
REBASE acronym: SpsSC132
Org_num: 55901
All begin LOE17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 230 | IS110 family transposase | |||
| 240 | R | SpsTT3774ORF7730P (100% identity) | SpsSC132ORF255P | |
| 245 | S | S.SpsTT3774ORF7730P (100% identity) | S.SpsSC132ORF255P | |
| 250 | DUF262 domain-containing protein | |||
| 255 | M | M.SpsTT3774ORF7730P (100% identity) | M.SpsSC132ORF255P | |
| 260 | 229 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9675 | helix-turn-helix domain-containing protein | |||
| ??? | M | M.SpsTT3774ORF17520P (100% identity) | M.SpsSC132ORF9680P | |
| 9690 | 114 aa hypothetical protein | |||
| 9785 | 207 aa hypothetical protein | |||
| 9790 | M | M.SpsTT3774DndCP (100% identity) | M.SpsSC132DndCP | |
| 9795 | DDE-type integrase/transposase/recombinase | |||
| 14465 | VOC family protein | |||
| 14475 | M | M.SpsTT3774ORF12735P (100% identity) | M.SpsSC132ORF14475P | |
| 14480 | R | SpsTT3774ORF12735P (100% identity) | SpsSC132ORF14475P | |
| 14485 | Lrp/AsnC ligand binding domain-containing | |||
| plasmid P1 | ||||
| 19280 | nucleotidyl transferase AbiEii/AbiGii toxin | |||
| 19285 | RM | SpsTT3774ORF24635P (100% identity) | SpsSC132ORF19285P | |
| 19290 | Bro-N domain-containing protein | |||
| plasmid P10 | ||||
| 24835 | cation diffusion facilitator family transporter | |||
| ??? | V | V.SpsTT3747ORF23395P (100% identity) | V.SpsSC132ORF24960P | |
| 24840 | R | SpsTT3747ORF23395P (100% identity) | SpsSC132ORF24960P | |
| 24845 | AAA family ATPase | |||
| 24850 | 69 aa hypothetical protein | |||
| 24855 | replication initiator protein A | |||
| 24860 | 182 aa hypothetical protein | |||
| 24865 | type IV secretory system conjugative DNA | |||
| 24870 | mobilization protein | |||
| 24935 | recombinase family protein | |||
| 24940 | AAA family ATPase | |||
| 24945 | Mu transposase C-terminal domain-containing | |||
| 24950 | recombinase family protein | |||
| 24955 | very short patch repair endonuclease | |||
| 24960 | M | M.SpsTT3747ORF23510P (100% identity) | M.SpsSC132ORF24960P | |
| 24965 | 401 aa hypothetical protein | |||
| plasmid P4 | ||||
| 21490 | HEPN domain-containing protein | |||
| 21495 | RM | SpsTT3774ORF21845P (100% identity) | SpsSC132ORF21495P | |
| 21500 | type II toxin-antitoxin system VapC family | |||