Sulfitobacter pseudonitzschiae TC12-52 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Sulfitobacter pseudonitzschiae TC12-52 RM systems
Ref: Qu,L. et al. unpublished
REBASE ref # 32465
| Sequence length: | GenBank #: | |
| Chromosome: | 3,850,683 bp | CP086816 |
| plasmid P2: | 290,597 bp | CP086818 |
REBASE acronym: SpsTC1252
Org_num: 55914
All begin LOE26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3425 | 229 aa hypothetical protein | |||
| 3430 | M | M.SpsTT3774ORF7730P (100% identity) | M.SpsTC1252ORF3430P | |
| 3435 | DUF262 domain-containing protein | |||
| 3440 | S | S.SpsTT3774ORF7730P (100% identity) | S.SpsTC1252ORF3430P | |
| 3445 | R | SpsTT3774ORF7730P (100% identity) | SpsTC1252ORF3430P | |
| 3455 | IS110 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1115 | alkane 1-monooxygenase | |||
| 1120 | M | M.SpsTT3774ORF5425P (100% identity) | GANTC | M.SpsTC1252ORF1120P |
| 1125 | ribonuclease HII | |||
| 13115 | DDE-type integrase/transposase/recombinase | |||
| 13120 | M | M.SpsTT3774DndCP (100% identity) | M.SpsTC1252DndCP | |
| 13125 | 207 aa hypothetical protein | |||
| 13225 | 114 aa hypothetical protein | |||
| ??? | M | M.SpsTT3774ORF17520P (100% identity) | M.SpsTC1252ORF13230P | |
| 13240 | helix-turn-helix domain-containing protein | |||
| plasmid P2 | ||||
| 19875 | type II toxin-antitoxin system VapC family | |||
| 19880 | RM | SpsTT3774ORF21845P (100% identity) | SpsTC1252ORF19880P | |
| 19885 | HEPN domain-containing protein | |||