Escherichia coli EBJ001 |
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Putative Escherichia coli EBJ001 RM systems
Ref: Yang,L. unpublished
REBASE ref # 27268
Complete sequence: 4,808,263 bp
GenBank #: CP086336
REBASE acronym: EcoEBJ001
Org_num: 53753
All begin C5N11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18170 | transposase domain-containing protein | |||
| 18175 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.EcoEBJ001ORF18180P |
| 18180 | M | M.EcoN001ORF18175P (100% identity) | GAACNNNNNTGC | M.EcoEBJ001ORF18180P |
| 18185 | R | EmaC12ORF18910P (100% identity) | GAACNNNNNTGC | EcoEBJ001ORF18180P |
| 18190 | IS66 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2275 | 55 aa hypothetical protein | |||
| 2280 | R | Sso8ORF19860P (100% identity) | EcoEBJ001ORF2280P | |
| 2285 | HNH endonuclease | |||
| 19885 | DNA-binding transcriptional regulator Fis | |||
| 19890 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoEBJ001ORF19890P |
| 19895 | 26 aa hypothetical protein | |||
| 20510 | ribulose-phosphate 3-epimerase | |||
| 20515 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEBJ001DamP |
| 20520 | cell division protein DamX | |||