Skermanella mucosa KEMB 2255-438 |
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Putative Skermanella mucosa KEMB 2255-438 RM systems
Ref: Lee,K. et al. unpublished
REBASE ref # 33575
| Sequence length: | GenBank #: | |
| chromosome SKMUc: | 6,407,183 bp | CP086106 |
| plasmid pSM-4: | 22,249 bp | CP086110 |
REBASE acronym: Smu438
Org_num: 55469
All begin JL100_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome SKMUc | ||||
| 10455 | M48 family metallopeptidase | |||
| 10460 | R | MspVF16ORF16730P (70% identity) | Smu438ORF10480P | |
| 10465 | IS256 family transposase | |||
| 10470 | 202 aa hypothetical protein | |||
| 10475 | S | S.MspXM1ORF445P (42% identity) | S.Smu438ORF10480P | |
| 10480 | M | M.MspVF16ORF16730P (82% identity) | M.Smu438ORF10480P | |
| 10485 | 236 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome SKMUc | ||||
| 5860 | IS5 family transposase | |||
| 5865 | M | M.SspW17ORFDP (91% identity) | M.Smu438ORF5865P | |
| 5870 | ATP-binding protein | |||
| 5875 | IS256 family transposase | |||
| 5880 | 29 aa hypothetical protein | |||
| 5885 | 161 aa hypothetical protein | |||
| 5890 | 609 aa hypothetical protein | |||
| 5895 | V | V.SspW17ORFDP (87% identity) | V.Smu438ORF5865P | |
| 5900 | transposase | |||
| 8660 | dihydroneopterin aldolase | |||
| 8665 | M | M.Sro458ORF8540P (100% identity) | GANTC | M.Smu438ORF8665P |
| 8670 | ribonuclease HII | |||
| plasmid pSM-4 | ||||
| 36420 | site-specific integrase | |||
| 36425 | M | M.SapORFEP (65% identity) | M.Smu438ORF36425P | |
| 36430 | restriction endonuclease subunit S | |||
| 36425 | N-6 DNA methylase | |||
| 36430 | S | S.MaeS298ORF2085P (49% identity) | S.Smu438ORF36430P | |
| 36435 | type II toxin-antitoxin system RelE/ParE family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome SKMUc | ||||
| 10445 | ATP-dependent RecD-like DNA helicase | |||
| 10450 | R | AbrREC3MrrP (83% identity) | Smu438MrrP | |
| 10455 | M48 family metallopeptidase | |||