Salmonella enterica subsp. enterica serovar Typhimurium S34 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium S34 RM systems
Ref: Shihan,Z. et al. unpublished
REBASE ref # 33785
Complete sequence: 4,983,099 bp
GenBank #: CP086118
REBASE acronym: SenS34
Org_num: 55348
All begin LLY43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20135 | restriction endonuclease | |||
| 20140 | R | StyUK1IIP (99% identity) | GAGNNNNNNRTAYG | SenS34ORF20145P |
| 20145 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS34ORF20145P |
| 20150 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS34ORF20145P |
| 20155 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.SenS34DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS34ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 3225 | DUF2732 domain-containing protein | |||
| 3230 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.SenS34ORF3230P |
| 3235 | replication endonuclease | |||
| 5625 | IS6-like element IS26 family transposase | |||
| 5630 | M | M.StyCORF187P (49% identity) | M.SenS34ORF5630P | |
| 5635 | thermonuclease family protein | |||
| 6215 | ead/Ea22-like family protein | |||
| 6220 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenS34ORF6220P |
| 6225 | DUF551 domain-containing protein | |||
| 9545 | IS6-like element IS26 family transposase | |||
| 9550 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenS34ORF9555P |
| 9555 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.SenS34ORF9555P |
| 9560 | IS1 family transposase | |||
| 9685 | phosphohydrolase | |||
| 9690 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS34DcmP |
| 9695 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS34DcmP |
| 9700 | drug/metabolite exporter YedA | |||
| 20295 | BREX system P-loop protein BrxC | |||
| 20300 | RM | StyUK1IV (100% identity) | GATCAG | SenS34ORF20300P |
| 20305 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17830 | small effector SsaA | |||
| 17835 | R | StyUK1IP (99% identity) | CAGAG | SenS34ORF17840P |
| 17840 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS34ORF17840P |
| 17845 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20130 | BrnT family toxin | |||
| 20135 | R | StyUK1MrrP (100% identity) | SenS34MrrP | |
| 20140 | type I restriction-modification system | |||