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Putative Bifidobacterium bifidum YIT 10347 RM systems
Ref: Ishikawa,E. et al. iScience 103363 (2021) In press
REBASE ref # 33208
Complete sequence: 2,149,912 bp
GenBank #: AP024712
REBASE acronym: Bbi10347
Org_num: 53051
All begin BF1_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
355 | 65 aa hypothetical protein | |||
356 | R | BloLC67ORFDP (32% identity) | CTGCAG | R1.Bbi10347ORF357P |
357 | M | M.BloLC67ORFEP (99% identity) | CTGCAG | M.Bbi10347ORF357P |
358 | R | Bbi2010ORF16P (100% identity) | CTGCAG | R2.Bbi10347ORF357P |
359 | 360 aa Hypothetical protein BBPR_0018 | |||
454 | phage integrase (truncated) | |||
455 | R | BbiBF3ORF180P (100% identity) | GRCGYC | Bbi10347ORF456P |
456 | M | M.Bbi3115ORF1711P (100% identity) | GRCGYC | M.Bbi10347ORF456P |
457 | Cell wall lytic enzyme (truncated) | |||
811 | 16S RNA methylase | |||
812 | R | BbiS6ORF8015P (100% identity) | C | Bbi10347ORF812P |
813 | GTP-binding protein | |||
949 | Integrase/recombinase (XerD/RipX family) | |||
950 | M | M.PmeBin303ORFDP (100% identity) | CTCGAG | M.Bbi10347ORF950P |
951 | R | PmeBin303ORFDP (100% identity) | CTCGAG | Bbi10347ORF950P |
952 | 290 aa hypothetical protein | |||
1027 | Transposase and inactivated derivatives | |||
1028 | R | Bbi3115ORFAP (100% identity) | Bbi10347ORF1029P | |
1029 | M | M.Bbi3115ORFAP (100% identity) | M.Bbi10347ORF1029P | |
1030 | transposase of IS1353 (truncated) | |||
1046 | Transposase part B | |||
??? | M | M.PmeBin303ORFAP (100% identity) | GAATTC | M.Bbi10347ORF1047P |
1048 | Pyrazinamidase/Nicotinamidase | |||
1391 | HipA domain | |||
1392 | M | M.BbiS17ORF1197P (91% identity) | M.Bbi10347ORF1392P | |
1393 | 240 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
443 | 166 aa hypothetical protein | |||
444 | R | Bfi002ORF4175P (99% identity) | Bbi10347ORF444P | |
445 | NTP pyrophosphohydrolase with NUDIX domain |