Collinsella stercoris DSM 13279 FDAARGOS_1572 |
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Putative Collinsella stercoris DSM 13279 FDAARGOS_1572 RM systems
Ref: Carlson,P. et al. unpublished
REBASE ref # 33089
Complete sequence: 2,460,750 bp
GenBank #: CP085935
REBASE acronym: Cst13279
Org_num: 53239
All begin LK434_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5780 | type II toxin-antitoxin system RelE/ParE family | |||
| 5785 | R | Cst13279aORF6195P (98% identity) | Cst13279ORF5815P | |
| 5790 | S | S5.Cst13279aORF6195P (100% identity) | S4.Cst13279ORF5815P | |
| 5795 | site-specific integrase | |||
| 5800 | S | S4.Cst13279aORF6195P (100% identity) | S3.Cst13279ORF5815P | |
| 5805 | S | S3.Cst13279aORF6195P (100% identity) | S2.Cst13279ORF5815P | |
| 5810 | S | S2.Cst13279aORF6195P (100% identity) | S1.Cst13279ORF5815P | |
| 5815 | M | M.Cst13279aORF6195P (100% identity) | M.Cst13279ORF5815P | |
| 5820 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1325 | BREX-1 system phosphatase PglZ type A | |||
| 1330 | RM | Cst13279aORF190BP (100% identity) | Cst13279ORF1330BP | |
| 1335 | DUF3800 domain-containing protein | |||
| 1340 | 69 aa hypothetical protein | |||
| 1345 | 120 aa hypothetical protein | |||
| 1350 | IS1595 family transposase | |||
| 1355 | RM | Cst13279aORF190AP (100% identity) | Cst13279ORF1330AP | |
| 1360 | BREX system P-loop protein BrxC | |||
| 5515 | 188 aa hypothetical protein | |||
| ??? | M | M.Cst13279aORF6485P (91% identity) | M.Cst13279ORF5520P | |
| 5530 | cysteine hydrolase | |||
| 6090 | 136 aa hypothetical protein | |||
| 6095 | R | Cst13279aORF5900P (100% identity) | GGTCTC | Cst13279ORF6100P |
| 6100 | M | M2.CstDORF413P (100% identity) | GGTCTC | M1.Cst13279ORF6100P |
| 6105 | M | M1.CstDORF413P (98% identity) | M2.Cst13279ORF6100P | |
| 6110 | DNA-3-methyladenine glycosylase | |||
| 7640 | 45 aa hypothetical protein | |||
| 7645 | M | M.Cst13279aORF4375P (100% identity) | M.Cst13279ORF7645P | |
| 7650 | 84 aa hypothetical protein | |||
| 9335 | LarC family nickel insertion protein | |||
| ??? | M | M.CstDORF903P (100% identity) | CCWGG | M.Cst13279ORF9345P |
| 9350 | R | CstDORF903P (100% identity) | CCWGG | Cst13279ORF9345P |
| 9355 | phosphodiesterase | |||