Salmonella enterica subsp. enterica serovar Typhi Suicune |
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Putative Salmonella enterica subsp. enterica serovar Typhi Suicune RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
Complete sequence: 4,791,720 bp
GenBank #: CP085807
REBASE acronym: SenSui
Org_num: 55324
All begin LJF45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19760 | restriction endonuclease | |||
| 19765 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | SenSuiORF19770P |
| 19770 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.SenSuiORF19770P |
| 19775 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.SenSuiORF19770P |
| 19780 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2215 | cell division protein DamX | |||
| 2220 | M | M.StyTDamP (100% identity) | GATC | M.SenSuiDamP |
| 2225 | ribulose-phosphate 3-epimerase | |||
| 2700 | DUF2556 family protein | |||
| 2705 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSuiORF2705P |
| 2710 | DNA-binding transcriptional regulator Fis | |||
| 9570 | DUF4060 family protein | |||
| 9575 | M | M.StyTORF1926P (95% identity) | M.SenSuiORF9575P | |
| 9580 | DGQHR domain-containing protein | |||
| 9635 | ead/Ea22-like family protein | |||
| 9640 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenSuiORF9640P |
| 9645 | DUF550 domain-containing protein | |||
| 14885 | drug/metabolite exporter YedA | |||
| 14890 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenSuiDcmP |
| 14895 | M | M.StyTDcmP (100% identity) | CCWGG | M.SenSuiDcmP |
| 14900 | phosphohydrolase | |||
| 19900 | YebC/PmpR family DNA-binding transcriptional | |||
| 19905 | R | Senst12ORF9665P (100% identity) | SenSuiORF19905P | |
| 19910 | 64 aa hypothetical protein | |||
| 21000 | 3-5 exonuclease | |||
| 21005 | M | M.StyTORF4329P (100% identity) | GATC | M.SenSuiORF21005P |
| 21010 | replication endonuclease | |||
| 22670 | TraR/DksA family transcriptional regulator | |||
| 22675 | M | M.StyTORF3409P (100% identity) | GATC | M.SenSuiORF22675P |
| 22680 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6640 | MFS transporter | |||
| 6645 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenSuiORF6645P |
| 6650 | R | StyTORF2507P (99% identity) | CAGAG | SenSuiORF6645P |
| 6655 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19755 | BrnT family toxin | |||
| 19760 | R | StyTMrrP (100% identity) | SenSuiMrrP | |
| 19765 | type I restriction-modification system | |||