Salmonella enterica subsp. enterica serovar Typhimurium Blastoise |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium Blastoise RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
Complete sequence: 4,874,281 bp
GenBank #: CP085819
REBASE acronym: SenBla
Org_num: 55326
All begin LJF65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5450 | restriction endonuclease | |||
| 5455 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenBlaORF5460P |
| 5460 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenBlaORF5460P |
| 5465 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenBlaORF5460P |
| 5470 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5610 | BREX system P-loop protein BrxC | |||
| 5615 | RM | SenWarORF11445P (100% identity) | GATCAG | SenBlaORF5615P |
| 5620 | AAA family ATPase | |||
| 11205 | DUF2556 family protein | |||
| 11210 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenBlaORF11210P |
| 11215 | DNA-binding transcriptional regulator Fis | |||
| 14530 | TraR/DksA family transcriptional regulator | |||
| 14535 | M | M.SspA39ORFGP (100% identity) | GATC | M.SenBlaORF14535P |
| 14540 | replication endonuclease | |||
| 15075 | ead/Ea22-like family protein | |||
| 15080 | M | M.Sens29958ORF6205P (100% identity) | M.SenBlaORF15080P | |
| 15085 | DUF550 domain-containing protein | |||
| 18460 | PerC family transcriptional regulator | |||
| 18465 | M | M.StyUK1V (100% identity) | GATC | M.SenBlaORF18465P |
| 18470 | RusA family crossover junction | |||
| 18705 | phosphohydrolase | |||
| 18710 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenBlaDcmP |
| 18715 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenBlaDcmP |
| 18720 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3190 | small effector SsaA | |||
| 3195 | R | StyUK1IP (99% identity) | CAGAG | SenBlaORF3200P |
| 3200 | M | M.StyUK1I (100% identity) | CAGAG | M.SenBlaORF3200P |
| 3205 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5445 | BrnT family toxin | |||
| 5450 | R | StyUK1MrrP (100% identity) | SenBlaMrrP | |
| 5455 | type I restriction-modification system | |||