Salmonella enterica subsp. enterica serovar Typhi MDUST348 |
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Putative Salmonella enterica subsp. enterica serovar Typhi MDUST348 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,793,333 bp
GenBank #: OU943338
REBASE acronym: SenST348
Org_num: 55323
All begin SAMEA2158835_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3879 | restriction system protein | |||
| 3880 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | SenST348ORF3881P |
| 3881 | M | M.StyTORF4575P (88% identity) | GAANNNNNNNNTCGC | M.SenST348ORF3881P |
| 3882 | M of type I restriction-modification system | |||
| 3883 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.SenST348ORF3881P |
| 3884 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 354 | Uncharacterised protein | |||
| 355 | M | M.StyTDamP (100% identity) | GATC | M.SenST348DamP |
| 356 | 3-epimerase | |||
| 454 | Uncharacterised protein | |||
| 455 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST348ORF455P |
| 456 | DNA-binding protein | |||
| 1846 | bacteriophage protein | |||
| 1847 | M | M.StyTORF1926P (100% identity) | GATC | M.SenST348ORF1847P |
| 1848 | bacteriophage protein | |||
| 1859 | bacteriophage protein | |||
| 1860 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenST348ORF1860P |
| 1861 | bacteriophage protein | |||
| 2882 | membrane protein | |||
| 2883 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenST348DcmP |
| 2884 | M | M.StyTDcmP (100% identity) | CCWGG | M.SenST348DcmP |
| 2885 | Uncharacterised protein | |||
| 3909 | Uncharacterised protein | |||
| 3910 | R | Senst12ORF9665P (100% identity) | SenST348ORF3910P | |
| 3911 | Uncharacterised protein | |||
| 4125 | exonuclease | |||
| 4126 | M | M.StyTORF4329P (100% identity) | GATC | M.SenST348ORF4126P |
| 4127 | Uncharacterised protein | |||
| 4455 | Uncharacterised protein | |||
| 4456 | M | M.StyTORF3409P (100% identity) | GATC | M.SenST348ORF4456P |
| 4457 | endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1249 | metabolite transport protein | |||
| 1250 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenST348ORF1250P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | SenST348ORF1250P |
| 1253 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3878 | Uncharacterised protein | |||
| 3879 | R | StyTMrrP (100% identity) | SenST348MrrP | |
| 3880 | R of type I restriction-modification system | |||