Salmonella enterica subsp. enterica serovar Typhimurium S29 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium S29 RM systems
Ref: Shihan,Z. et al. unpublished
REBASE ref # 33778
| Sequence length: | GenBank #: | |
| Chromosome: | 5,004,066 bp | CP085699 |
| plasmid pS29-IncI1: | 88,502 bp | CP085700 |
REBASE acronym: SenS29
Org_num: 55347
All begin LJN59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20350 | restriction endonuclease | |||
| 20355 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS29ORF20360P |
| 20360 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS29ORF20360P |
| 20365 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS29ORF20360P |
| 20370 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.SenS29DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS29ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 3225 | DUF2732 domain-containing protein | |||
| 3230 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.SenS29ORF3230P |
| 3235 | replication endonuclease | |||
| 5645 | IS6-like element IS26 family transposase | |||
| 5650 | M | M.StyCORF187P (49% identity) | M.SenS29ORF5650P | |
| 5655 | thermonuclease family protein | |||
| 6295 | ead/Ea22-like family protein | |||
| 6300 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenS29ORF6300P |
| 6305 | DUF551 domain-containing protein | |||
| 9630 | PerC family transcriptional regulator | |||
| 9635 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.SenS29ORF9635P |
| 9640 | RusA family crossover junction | |||
| 9885 | phosphohydrolase | |||
| 9890 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS29DcmP |
| 9895 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS29DcmP |
| 9900 | drug/metabolite exporter YedA | |||
| 20515 | BREX system P-loop protein BrxC | |||
| 20520 | RM | StyUK1IV (100% identity) | GATCAG | SenS29ORF20520P |
| 20525 | AAA family ATPase | |||
| plasmid pS29-IncI1 | ||||
| 24650 | 103 aa hypothetical protein | |||
| 24655 | M | M.Ssp14523ORF22990P (100% identity) | M.SenS29ORF24655P | |
| 24660 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18045 | small effector SsaA | |||
| 18050 | R | StyUK1IP (99% identity) | CAGAG | SenS29ORF18055P |
| 18055 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS29ORF18055P |
| 18060 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20345 | BrnT family toxin | |||
| 20350 | R | StyUK1MrrP (100% identity) | SenS29MrrP | |
| 20355 | type I restriction-modification system | |||