Escherichia coli VCSW8 |
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Putative Escherichia coli VCSW8 RM systems
Ref: Wong,V.C. et al. unpublished
REBASE ref # 33414
Complete sequence: 4,672,036 bp
GenBank #: CP085488
REBASE acronym: EcoVCSW8
Org_num: 53942
All begin LJY68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19345 | 128 aa hypothetical protein | |||
| 19350 | M | M.EcoSCU478ORF9130P (100% identity) | TGHAYNNNNCTNC | M.EcoVCSW8ORF19350P |
| 19355 | S | S.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | S.EcoVCSW8ORF19350P |
| 19360 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | cell division protein DamX | |||
| 1690 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoVCSW8DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoVCSW8ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 5455 | TraR/DksA family transcriptional regulator | |||
| 5460 | M | M.EcoLA3ORF5735P (100% identity) | GATC | M.EcoVCSW8ORF5460P |
| 5465 | replication endonuclease | |||
| 8865 | phosphohydrolase | |||
| 8870 | M | M.EcoV02DcmP (100% identity) | CCWGG | M.EcoVCSW8DcmP |
| 8875 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoVCSW8DcmP |
| 8880 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19330 | HNH endonuclease | |||
| 19335 | R | SflN101McrBP (100% identity) | EcoVCSW8McrBP | |
| 19340 | R | EcoSCU478McrCP (100% identity) | EcoVCSW8McrCP | |
| 19345 | 128 aa hypothetical protein | |||