Escherichia coli O157:H7 146N4 |
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Putative Escherichia coli O157:H7 146N4 RM systems
Ref: Amadio,A.F. et al. unpublished
REBASE ref # 33396
Complete sequence: 5,528,657 bp
GenBank #: CP076237
REBASE acronym: Eco146N4
Org_num: 53844
All begin JKN67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24220 | DUF262 domain-containing protein | |||
| 24225 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco146N4ORF24230P |
| 24230 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco146N4ORF24230P |
| 24235 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco146N4ORF24230P |
| 24240 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2320 | cell division protein DamX | |||
| 2325 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco146N4DamP |
| 2330 | ribulose-phosphate 3-epimerase | |||
| 2835 | DUF2556 family protein | |||
| 2840 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco146N4ORF2840P |
| 2845 | DNA-binding transcriptional regulator Fis | |||
| 8720 | PerC family transcriptional regulator | |||
| 8725 | M | M.Eco293ORF22050P (100% identity) | GATC | M.Eco146N4ORF8725P |
| 8730 | LexA family transcriptional regulator | |||
| 9750 | recombination protein NinB | |||
| 9755 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco146N4ORF9755P |
| 9760 | NinE family protein | |||
| 10555 | phosphohydrolase | |||
| 10560 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco146N4DcmP |
| 10565 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco146N4DcmP |
| 10570 | drug/metabolite exporter YedA | |||
| 14060 | TrmB family transcriptional regulator | |||
| 14065 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco146N4ORF14065P | |
| 14080 | DUF1737 domain-containing protein | |||
| 24010 | RusA family crossover junction | |||
| 24015 | M | M.EcosA32ORF3630P (100% identity) | GATC | M.Eco146N4ORF24015P |
| 24020 | PerC family transcriptional regulator | |||
| 24455 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco146N4ORF24455P |
| 24460 | DEAD/DEAH box helicase | |||
| 24490 | N-acetylneuraminic acid mutarotase | |||
| 24495 | R | Ecos1613ORF26795P (100% identity) | Eco146N4ORF24495P | |
| 24500 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24240 | endoribonuclease SymE | |||
| 24245 | R | EcosPA8GmrSDP (55% identity) | Eco146N4GmrDP | |
| 24250 | R | Ecos1613GmrSP (100% identity) | Eco146N4GmrSP | |
| 24255 | DUF1127 domain-containing protein | |||