Salmonella enterica subsp. enterica serovar Newport CVM N16S224 |
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Putative Salmonella enterica subsp. enterica serovar Newport CVM N16S224 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,831,349 bp | CP082641 |
| plasmid pN16S224-1: | 71,790 bp | CP082642 |
REBASE acronym: SenS224
Org_num: 55294
All begin CWY79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19900 | 322 aa hypothetical protein | |||
| 19905 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | SenS224ORF19910P |
| 19910 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.SenS224ORF19910P |
| 19915 | S | S.SenS1655ORF21020P (100% identity) | GACNNNNNNNRTCC | S.SenS224ORF19910P |
| 19920 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | M.StyTDamP (100% identity) | GATC | M.SenS224DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS224ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 9280 | phosphohydrolase | |||
| 9285 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenS224DcmP |
| 9290 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenS224DcmP |
| 9295 | drug/metabolite exporter YedA | |||
| 14130 | 112 aa hypothetical protein | |||
| 14135 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.SenS224ORF14135P |
| 14140 | 82 aa hypothetical protein | |||
| 20040 | YebC/PmpR family DNA-binding transcriptional | |||
| 20045 | R | SenS1655ORF21155P (100% identity) | SenS224ORF20045P | |
| 20050 | toprim domain-containing protein | |||
| plasmid pN16S224-1 | ||||
| 23535 | 73 aa hypothetical protein | |||
| 23540 | M | M.SspPIBORF23080P (100% identity) | M.SenS224ORF23540P | |
| 23545 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17700 | small effector SsaA | |||
| 17705 | R | Ssp6947IIP (100% identity) | CAGAG | SenS224ORF17710P |
| 17710 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.SenS224ORF17710P |
| 17715 | MFS transporter | |||