Clostridium perfringens CPI 103K-3 |
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Putative Clostridium perfringens CPI 103K-3 RM systems
Ref: Jaakkola,K. et al. unpublished
REBASE ref # 33254
| Sequence length: | GenBank #: | |
| Chromosome: | 3,256,086 bp | CP075988 |
| plasmid pCPCPI103K-3_1: | 75,262 bp | CP075989 |
| plasmid pCPCPI103K-3_3: | 50,987 bp | CP075991 |
REBASE acronym: Cpe103K3
Org_num: 53214
All begin KLF49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12760 | M48 family metallopeptidase | |||
| 12765 | R | Cpe31ORF13055P (100% identity) | GCNANNNNNNRTGT | Cpe103K3ORF12795P |
| 12770 | 142 aa hypothetical protein | |||
| 12775 | 368 aa hypothetical protein | |||
| 12780 | TIR domain-containing protein | |||
| 12785 | 144 aa hypothetical protein | |||
| 12790 | S | S.Cpe31ORF13055P (100% identity) | GCNANNNNNNRTGT | S.Cpe103K3ORF12795P |
| 12795 | M | M.Cpe31ORF13055P (100% identity) | GCNANNNNNNRTGT | M.Cpe103K3ORF12795P |
| 12800 | 357 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4570 | DUF4352 domain-containing protein | |||
| 4575 | M | M.Cpe31ORF4580P (100% identity) | M.Cpe103K3ORF4575P | |
| 4580 | ATP-binding protein | |||
| 5155 | DUF1998 domain-containing protein | |||
| 5160 | M | M.CpeS1ORF18840P (100% identity) | M.Cpe103K3ORF5160P | |
| 5165 | ImmA/IrrE family metallo-endopeptidase | |||
| 14370 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14375 | M | M.Cpe53kr1ORF14595P (100% identity) | GTATAC | M.Cpe103K3ORF14375P |
| 14380 | YhgE/Pip domain-containing protein | |||
| plasmid pCPCPI103K-3_1 | ||||
| 14955 | 101 aa hypothetical protein | |||
| 14960 | M | M.Cpe8ORF15315P (100% identity) | M.Cpe103K3ORF14960P | |
| 14965 | 57 aa hypothetical protein | |||
| plasmid pCPCPI103K-3_3 | ||||
| 15700 | 71 aa hypothetical protein | |||
| 15705 | M | M.Cpe4969ORF1715P (100% identity) | M.Cpe103K3ORF15705P | |
| 15710 | 48 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2010 | serine/threonine protein kinase | |||
| 2015 | M | M.Cpe31ORF2020P (100% identity) | ACAGC | M.Cpe103K3ORF2015P |
| 2020 | R | Cpe4969ORF411P (100% identity) | ACAGC | Cpe103K3ORF2015P |
| 2025 | 183 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5015 | 103 aa hypothetical protein | |||
| 5020 | R | CpeNE18McrBP (100% identity) | Cpe103K3McrBP | |
| 5025 | R | CpeNE18McrCP (100% identity) | Cpe103K3McrCP | |
| 5030 | SdpI family protein | |||