Clostridium perfringens 20/85 |
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Putative Clostridium perfringens 20/85 RM systems
Ref: Jaakkola,K. et al. unpublished
REBASE ref # 33254
Complete sequence: 2,927,516 bp
GenBank #: CP075977
REBASE acronym: Cpe2085
Org_num: 53199
All begin KLF40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4320 | topoisomerase DNA-binding C4 zinc finger | |||
| 4325 | M | M.Cpe8679I (100% identity) | M.Cpe2085ORF4325P | |
| 4330 | S | S1.Cpe8679IP (100% identity) | CTANNNNNNNTGAA | S1.Cpe2085ORF4325P |
| 4335 | S | S2.Cpe8679I (100% identity) | CCYANNNNNNNTAG | S2.Cpe2085ORF4325P |
| 4340 | tyrosine-type recombinase/integrase | |||
| 4345 | S | S2.Cpe12647ORF4555P (48% identity) | S3.Cpe2085ORF4325P | |
| 4350 | 333 aa hypothetical protein | |||
| 4355 | 190 aa hypothetical protein | |||
| 4360 | R | Cpe8679IP (100% identity) | Cpe2085ORF4325P | |
| 4365 | HNH endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13100 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 13105 | M | M.Cpe8679II (100% identity) | GTATAC | M.Cpe2085ORF13105P |
| 13110 | YhgE/Pip domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4300 | 178 aa hypothetical protein | |||
| 4305 | R | Cpe8679ORF918P (100% identity) | Cpe2085ORF4305P | |
| 4310 | 61 aa hypothetical protein | |||