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Putative Clostridium perfringens CPI 53k-r1 RM systems
Ref: Jaakkola,K. et al. unpublished
REBASE ref # 33254
Sequence length: | GenBank #: | |
Chromosome: | 3,274,194 bp | CP075934 |
plasmid pCPCPI53k-r1_1: | 129,891 bp | CP075935 |
plasmid pCPCPI53k-r1_2: | 70,011 bp | CP075936 |
plasmid pCPCPI53k-r1_3: | 48,590 bp | CP075937 |
REBASE acronym: Cpe53kr1
Org_num: 53218
All begin KLF52_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4835 | 166 aa hypothetical protein | |||
4840 | M | M.Cpe905ORF9955P (100% identity) | M.Cpe53kr1ORF4840P | |
4845 | 332 aa hypothetical protein | |||
5045 | 358 aa hypothetical protein | |||
5050 | M | M1.Cpe88ORF5070P (85% identity) | M.Cpe53kr1ORF5050P | |
5055 | DNA cytosine methyltransferase | |||
5050 | DNA cytosine methyltransferase | |||
5055 | M | M2.Cpe88ORF5070P (100% identity) | M.Cpe53kr1ORF5055P | |
??? | AAA family ATPase | |||
5055 | DNA cytosine methyltransferase | |||
??? | R | R1.Cpe21D5ORFFP (61% identity) | R1.Cpe53kr1ORF5060P | |
5065 | R | R2.Cpe21D5ORFFP (100% identity) | R2.Cpe53kr1ORF5060P | |
5070 | 136 aa hypothetical protein | |||
12335 | ParB N-terminal domain-containing protein | |||
12340 | R | MspMM2ORF8445P (63% identity) | Cpe53kr1ORF12340P | |
12345 | modification methylase | |||
12340 | HNH endonuclease | |||
12345 | M | M.Mca82ORF12445P (50% identity) | M.Cpe53kr1ORF12345P | |
12350 | pentapeptide repeat-containing protein | |||
14590 | peptide-methionine (S)-S-oxide reductase MsrA | |||
14595 | M | M.Cpe31ORF14635P (100% identity) | GTATAC | M.Cpe53kr1ORF14595P |
14600 | YhgE/Pip domain-containing protein | |||
plasmid pCPCPI53k-r1_1 | ||||
15000 | M | M.CpeQHY2ORF15520P (100% identity) | M.Cpe53kr1ORF15000P | |
15005 | 94 aa hypothetical protein | |||
plasmid pCPCPI53k-r1_2 | ||||
15715 | 101 aa hypothetical protein | |||
15720 | M | M.CpeS10ORF15250P (100% identity) | M.Cpe53kr1ORF15720P | |
15725 | 57 aa hypothetical protein | |||
15995 | DUF4236 domain-containing protein | |||
16000 | M | M.CpeF5603ORFAP (100% identity) | M.Cpe53kr1ORF16000P | |
16005 | 94 aa hypothetical protein | |||
plasmid pCPCPI53k-r1_3 | ||||
16110 | 57 aa hypothetical protein | |||
16115 | M | M.Cpe8ORF15315P (100% identity) | M.Cpe53kr1ORF16115P | |
16120 | 101 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4910 | 103 aa hypothetical protein | |||
4915 | R | CpeML2McrBP (100% identity) | Cpe53kr1McrB3P | |
4920 | R | CpeAMcrCP (95% identity) | Cpe53kr1McrC3P | |
4925 | SdpI family protein | |||
4945 | CPBP family intramembrane metalloprotease | |||
4950 | R | CpeS10McrBP (80% identity) | Cpe53kr1McrB2P | |
4955 | McrC family protein | |||
4950 | AAA family ATPase | |||
4955 | R | CpeS10McrCP (99% identity) | Cpe53kr1McrC2P | |
4960 | AAA family ATPase | |||
5035 | ribosomal protein L7/L12 | |||
5040 | R | Cpe2aMcrB3P (100% identity) | Cpe53kr1McrBP | |
5045 | R | Cpe21D5McrCP (98% identity) | Cpe53kr1McrCP | |
5050 | DNA cytosine methyltransferase |