Clostridium perfringens CPLi3-1 |
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Putative Clostridium perfringens CPLi3-1 RM systems
Ref: Jaakkola,K. et al. unpublished
REBASE ref # 33254
| Sequence length: | GenBank #: | |
| Chromosome: | 3,294,158 bp | CP075917 |
| plasmid pCPCPLi3-1_1: | 75,262 bp | CP075918 |
| plasmid pCPCPLi3-1_3: | 50,987 bp | CP075920 |
| plasmid pCPCPLi3-1_4: | 37,526 bp | CP075921 |
REBASE acronym: Cpe31
Org_num: 53225
All begin KLF44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13020 | M48 family metallopeptidase | |||
| 13025 | R | Cpe11144IP (100% identity) | GCNANNNNNNRTGT | Cpe31ORF13055P |
| 13030 | 142 aa hypothetical protein | |||
| 13035 | 368 aa hypothetical protein | |||
| 13040 | TIR domain-containing protein | |||
| 13045 | 144 aa hypothetical protein | |||
| 13050 | S | S.Cpe103K3ORF12795P (100% identity) | GCNANNNNNNRTGT | S.Cpe31ORF13055P |
| 13055 | M | M.Cpe11144I (100% identity) | GCNANNNNNNRTGT | M.Cpe31ORF13055P |
| 13060 | 357 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4575 | DUF4352 domain-containing protein | |||
| 4580 | M | M.Cpe103K3ORF4575P (100% identity) | M.Cpe31ORF4580P | |
| 4585 | ATP-binding protein | |||
| 5160 | DUF1998 domain-containing protein | |||
| 5165 | M | M.CpeS1ORF18840P (100% identity) | M.Cpe31ORF5165P | |
| 5170 | 50 aa hypothetical protein | |||
| 6825 | 80 aa hypothetical protein | |||
| 6830 | M | M.Cpe80ORF6205P (92% identity) | M.Cpe31ORF6830P | |
| 6835 | 59 aa hypothetical protein | |||
| 14630 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14635 | M | M.Cpe53kr1ORF14595P (100% identity) | GTATAC | M.Cpe31ORF14635P |
| 14640 | YhgE/Pip domain-containing protein | |||
| plasmid pCPCPLi3-1_1 | ||||
| 15415 | 57 aa hypothetical protein | |||
| 15420 | M | M.Cpe8ORF15315P (100% identity) | M.Cpe31ORF15420P | |
| 15425 | 101 aa hypothetical protein | |||
| plasmid pCPCPLi3-1_3 | ||||
| 16045 | 71 aa hypothetical protein | |||
| 16050 | M | M.Cpe4969ORF1715P (100% identity) | M.Cpe31ORF16050P | |
| 16055 | 48 aa hypothetical protein | |||
| plasmid pCPCPLi3-1_4 | ||||
| 16295 | SH3 domain-containing protein | |||
| 16300 | M | M.Cpe391aORF14675P (99% identity) | M.Cpe31ORF16300P | |
| 16305 | cobalt ABC transporter permease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2015 | serine/threonine protein kinase | |||
| 2020 | M | M.Cpe1527aORF2025P (100% identity) | ACAGC | M.Cpe31ORF2020P |
| 2025 | R | Cpe4969ORF411P (100% identity) | ACAGC | Cpe31ORF2020P |
| 2030 | 183 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5020 | 103 aa hypothetical protein | |||
| 5025 | R | CpeNE18McrBP (100% identity) | Cpe31McrBP | |
| 5030 | R | CpeNE18McrCP (100% identity) | Cpe31McrCP | |
| 5035 | SdpI family protein | |||