Salmonella enterica subsp. enterica serovar Typhi 681355 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 681355 RM systems
Ref: Greig,D.R. et al. unpublished
REBASE ref # 33781
Complete sequence: 4,782,729 bp
GenBank #: CP083411
REBASE acronym: Sen681355
Org_num: 55319
All begin EXC25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4260 | endoribonuclease SymE | |||
| 4265 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen681355ORF4275P |
| 4270 | 46 aa hypothetical protein | |||
| 4275 | M | M.StyTORF4575P (88% identity) | GAANNNNNNNNTCGC | M.Sen681355ORF4275P |
| 4280 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen681355ORF4275P |
| 4285 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1400 | replication endonuclease | |||
| 1405 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen681355ORF1405P |
| 1410 | TraR/DksA family transcriptional regulator | |||
| 3050 | replication endonuclease | |||
| 3055 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen681355ORF3055P |
| 3060 | 3-5 exonuclease | |||
| 4130 | 79 aa hypothetical protein | |||
| 4135 | R | Senst12ORF9665P (100% identity) | Sen681355ORF4135P | |
| 4140 | 91 aa hypothetical protein | |||
| 9130 | phosphohydrolase | |||
| 9135 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen681355DcmP |
| 9140 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen681355DcmP |
| 9145 | drug/metabolite exporter YedA | |||
| 14360 | DUF550 domain-containing protein | |||
| 14365 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen681355ORF14365P |
| 14370 | ead/Ea22-like family protein | |||
| 14425 | DGQHR domain-containing protein | |||
| ??? | M | M.SenCEPR1ORF14095P (100% identity) | M.Sen681355ORF14430P | |
| 14435 | DUF4060 family protein | |||
| 21280 | DNA-binding transcriptional regulator Fis | |||
| 21285 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen681355ORF21285P |
| 21290 | DUF2556 family protein | |||
| 21770 | ribulose-phosphate 3-epimerase | |||
| 21775 | M | M.StyTDamP (100% identity) | GATC | M.Sen681355DamP |
| 21780 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9050 | shufflon system plasmid conjugative transfer | |||
| 9055 | R | StyTORF872P (100% identity) | CAAACC | Sen681355ORF9060P |
| 9060 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.Sen681355ORF9060P |
| 9065 | SpnT protein | |||
| 17335 | small effector SsaA | |||
| 17340 | R | StyTORF2507P (99% identity) | CAGAG | Sen681355ORF17345P |
| 17345 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen681355ORF17345P |
| 17350 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4280 | type I restriction-modification system | |||
| 4285 | R | StyTMrrP (100% identity) | Sen681355MrrP | |
| 4290 | BrnT family toxin | |||