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Putative Escherichia fergusonii 5zf15-2-1 RM systems
Ref: Liu,R. unpublished
REBASE ref # 31256
Sequence length: | GenBank #: | |
Chromosome: | 4,934,492 bp | CP079891 |
plasmid p15ZF15-2-1: | 110,545 bp | CP079892 |
REBASE acronym: Efe1521
Org_num: 53971
All begin KYD87_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5475 | GTPase family protein | |||
5480 | M | M.SflN97ORF14060P (100% identity) | M.Efe1521ORF24640P | |
5485 | S | S.SflN97ORF14060P (100% identity) | S.Efe1521ORF24640P | |
5490 | R | SflN97ORF14060P (99% identity) | Efe1521ORF24640P | |
5495 | IS1 family transposase | |||
12115 | IS3 family transposase | |||
12120 | R | KpnF891ORF23410P (99% identity) | Efe1521ORF12130P | |
12125 | M48 family metallopeptidase | |||
12130 | M | M.KpnF891ORF23410P (100% identity) | M.Efe1521ORF12130P | |
12135 | S | S.KpnF891ORF23410P (100% identity) | S.Efe1521ORF12130P | |
12140 | 62 aa hypothetical protein | |||
plasmid p15ZF15-2-1 | ||||
24635 | DNA polymerase III subunit theta | |||
24640 | M | M.SflN97ORF14060P (100% identity) | M.Efe1521ORF24640P | |
24645 | S | S.SflN97ORF14060P (100% identity) | S.Efe1521ORF24640P | |
24650 | R | SflN97ORF14060P (99% identity) | Efe1521ORF24640P | |
24655 | 158 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4415 | NinE family protein | |||
4420 | M | M.Ecosa7ORFEP (94% identity) | GATC | M.Efe1521ORF4420P |
4425 | recombination protein NinB | |||
12015 | RM | Efe65411ORF19340P (100% identity) | Efe1521ORF12015P | |
12020 | DEAD/DEAH box helicase | |||
12050 | N-acetylneuraminic acid mutarotase | |||
12055 | R | Efe65411ORF19380P (100% identity) | Efe1521ORF12055P | |
12060 | peptidase | |||
12790 | DNA-binding transcriptional regulator Fis | |||
12795 | M | M.EfeTORF37040P (100% identity) | ATGCAT | M.Efe1521ORF12795P |
12800 | DUF2556 family protein | |||
13315 | ribulose-phosphate 3-epimerase | |||
13320 | M | M.EfeTDamP (100% identity) | GATC | M.Efe1521DamP |
13325 | cell division protein DamX | |||
16940 | bifunctional isocitrate dehydrogenase | |||
16945 | M | M.EfeC10ORF1445P (100% identity) | CCWGG | M.Efe1521ORF16945P |
16950 | glyoxylate bypass operon transcriptional | |||
18540 | PerC family transcriptional regulator | |||
18545 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Efe1521ORF18545P |
18550 | LexA family transcriptional regulator | |||
18580 | 67 aa hypothetical protein | |||
18585 | M | M.Sso63633ORF22290P (100% identity) | M.Efe1521ORF18585P | |
18590 | phage lysis protein EssD | |||
22640 | flagella biosynthesis regulator Flk | |||
22645 | M | M.Efe65411ORF7205P (100% identity) | M.Efe1521ORF22645P | |
22650 | Com family DNA-binding transcriptional | |||
23660 | TraR/DksA family transcriptional regulator | |||
23665 | M | M.SflP099ORF15630P (98% identity) | GATC | M.Efe1521ORF23665P |
23670 | replication endonuclease | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5650 | IS5 family transposase | |||
5655 | R | SflN97McrCP (99% identity) | Efe1521McrCP | |
5660 | R | SflN97McrBP (100% identity) | Efe1521McrBP | |
5665 | zinc-ribbon domain-containing protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid p15ZF15-2-1 | ||||
24690 | 76 aa hypothetical protein | |||
24695 | M | M.Sso524ORF460P (100% identity) | GATC | M.Efe1521ORF24695P |
24700 | 269 aa hypothetical protein |