Escherichia coli CT01 |
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Putative Escherichia coli CT01 RM systems
Ref: Yang,X. et al. unpublished
REBASE ref # 33263
| Sequence length: | GenBank #: | |
| Chromosome: | 4,886,825 bp | CP081791 |
| plasmid unnamed1: | 94,799 bp | CP081792 |
| plasmid unnamed3: | 43,671 bp | CP081794 |
REBASE acronym: EcoCT01
Org_num: 53669
All begin J6O14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4075 | IS6-like element IS26 family transposase | |||
| 4080 | M | M.EcoAH04ORF4075P (100% identity) | M.EcoCT01ORF4080P | |
| 4085 | S | S.EcoE35ORF23380P (46% identity) | S1.EcoCT01ORF4080P | |
| 4090 | S | S.EcoE35ORF23380P (46% identity) | S2.EcoCT01ORF4080P | |
| 4095 | R | EcoE35ORF23380P (100% identity) | EcoCT01ORF4080P | |
| 4100 | recombinase family protein | |||
| plasmid unnamed1 | ||||
| 24680 | 119 aa hypothetical protein | |||
| 24685 | R | EcoAH04ORF24680P (100% identity) | EcoCT01ORF24695P | |
| 24690 | S | S.EcoAH04ORF24680P (100% identity) | S.EcoCT01ORF24695P | |
| 24695 | M | M.EcoAH04ORF24680P (100% identity) | M.EcoCT01ORF24695P | |
| 24700 | DNA polymerase III subunit theta | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoCT01ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 3455 | DEAD/DEAH box helicase | |||
| 3460 | RM | Sma1978ORFHP (99% identity) | CTTGAC | EcoCT01ORF3460P |
| 3465 | IS66 family transposase | |||
| 4150 | IS1 family transposase | |||
| 4155 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.EcoCT01ORF4155P |
| 4160 | R | Sen23701ORF24490P (100% identity) | CCWGG | EcoCT01ORF4155P |
| 4165 | IS6-like element IS26 family transposase | |||
| 9470 | phosphohydrolase | |||
| 9475 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoCT01DcmP |
| 9480 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoCT01DcmP |
| 9485 | drug/metabolite exporter YedA | |||
| 15855 | replication endonuclease | |||
| 15860 | M | M.EcoPE15ORF23185P (100% identity) | GATC | M.EcoCT01ORF15860P |
| 15865 | TraR/DksA family transcriptional regulator | |||
| 18920 | LexA family transcriptional regulator | |||
| 18925 | M | M.EcoKo009ORF3525P (100% identity) | GATC | M.EcoCT01ORF18925P |
| 18930 | PerC family transcriptional regulator | |||
| 20545 | phage lysis protein EssD | |||
| 20550 | M | M.Sso63633ORF22290P (100% identity) | M.EcoCT01ORF20550P | |
| 20555 | 67 aa hypothetical protein | |||
| 22110 | DinI family protein | |||
| 22115 | R | EcoTIF10ORFCP (100% identity) | CCWGG | EcoCT01ORF22120P |
| 22120 | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoCT01ORF22120P | |
| 22125 | 257 aa hypothetical protein | |||
| 22305 | LexA family transcriptional regulator | |||
| 22310 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoCT01ORF22310P |
| 22315 | PerC family transcriptional regulator | |||
| plasmid unnamed3 | ||||
| 25055 | PerC family transcriptional regulator | |||
| 25060 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoCT01ORF25060P |
| 25065 | LexA family transcriptional regulator | |||
| 25250 | 257 aa hypothetical protein | |||
| 25255 | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoCT01ORF25255P | |
| 25260 | R | EcoTIF10ORFCP (100% identity) | CCWGG | EcoCT01ORF25255P |
| 25265 | DinI family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3275 | inovirus Gp2 family protein | |||
| 3280 | R | SenLASSORF19350P (100% identity) | EcoCT01ORF3285P | |
| 3285 | M | M.Sen5006ORF16245P (100% identity) | M.EcoCT01ORF3285P | |
| 3290 | Cd(II)/Pb(II)-responsive transcriptional | |||