Streptococcus suis SZ1908 |
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Putative Streptococcus suis SZ1908 RM systems
Ref: Guo,G. et al. unpublished
REBASE ref # 33886
Complete sequence: 2,137,458 bp
GenBank #: CP082948
REBASE acronym: SsuSZ1908
Org_num: 55846
All begin K8227_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3965 | FAD-containing oxidoreductase | |||
| 3970 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | SsuSZ1908ORF3975P |
| 3975 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.SsuSZ1908ORF3975P |
| 3980 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsuSZ1908ORF3975P |
| 3985 | 243 aa hypothetical protein | |||
| 6975 | ribose-5-phosphate isomerase RpiA | |||
| 6980 | S | S2.SsucSS389ORF6590P (100% identity) | S2.SsuSZ1908ORF6990P | |
| 6985 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.SsuSZ1908ORF6990P |
| 6990 | M | M.SsuiS10ORFBP (100% identity) | M.SsuSZ1908ORF6990P | |
| 6995 | R | SsuiS10ORFBP (100% identity) | SsuSZ1908ORF6990P | |
| 7000 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3050 | helix-turn-helix domain-containing protein | |||
| 3055 | M | M1.SsuORF657P (100% identity) | M1.SsuSZ1908ORF3055P | |
| 3060 | HNH endonuclease | |||
| 3065 | M | M2.SsuORF657P (100% identity) | M2.SsuSZ1908ORF3055P | |
| 3070 | 82 aa hypothetical protein | |||
| 3245 | replication initiator protein A | |||
| 3250 | M | M.SsuORF569P (100% identity) | M.SsuSZ1908ORF3250P | |
| 3255 | 142 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3910 | 64 aa hypothetical protein | |||
| ??? | M | M.SsuiS10ORFEP (100% identity) | M.SsuSZ1908ORF3915P | |
| 3925 | R | SsuiS10ORFEP (100% identity) | SsuSZ1908ORF3915P | |
| 3930 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4705 | 262 aa hypothetical protein | |||
| 4710 | R | SsuiS10McrBP (100% identity) | SsuSZ1908McrBP | |
| 4715 | R | SsucSS389McrCP (100% identity) | SsuSZ1908McrCP | |
| 4720 | glutamine-hydrolyzing GMP synthase | |||