Salmonella enterica subsp. enterica serovar Newlands ZC-S1 3rd |
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Putative Salmonella enterica subsp. enterica serovar Newlands ZC-S1 3rd RM systems
Ref: Cong,C. et al. Food Res Int 147, 110480 (2021)
REBASE ref # 33777
Complete sequence: 4,679,998 bp
GenBank #: CP082916
REBASE acronym: SenZCS1
Org_num: 55293
All begin K8862_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7710 | NERD domain-containing protein/DEAD/DEAH box | |||
| 7715 | M | M.SspSAL045ORF19385P (100% identity) | GGYANNNNNNTCG | M.SenZCS1ORF7715P |
| 7720 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenZCS1ORF7715P |
| 7725 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenZCS1ORF7715P |
| 7730 | endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2090 | drug/metabolite exporter YedA | |||
| 2095 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenZCS1DcmP |
| 2100 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenZCS1DcmP |
| 2105 | phosphohydrolase | |||
| 7840 | YebC/PmpR family DNA-binding transcriptional | |||
| 7845 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenZCS1ORF7845P |
| 7850 | IS3 family transposase | |||
| 12750 | cell division protein DamX | |||
| 12755 | M | M.StyTDamP (100% identity) | GATC | M.SenZCS1DamP |
| 12760 | ribulose-phosphate 3-epimerase | |||
| 13240 | DUF2556 family protein | |||
| 13245 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenZCS1ORF13245P |
| 13250 | DNA-binding transcriptional regulator Fis | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5625 | small effector SsaA | |||
| 5630 | R | SspSAL045ORF17295P (100% identity) | CAGAG | SenZCS1ORF5635P |
| 5635 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.SenZCS1ORF5635P |
| 5640 | MFS transporter | |||