Salmonella enterica subsp. enterica serovar Typhimurium CVM N18S2188 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM N18S2188 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,861,574 bp | CP082523 |
| plasmid pN18S2188-1: | 160,500 bp | CP082525 |
REBASE acronym: SenS2188
Org_num: 55337
All begin FWX01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20355 | restriction endonuclease | |||
| 20360 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS2188ORF20365P |
| 20365 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS2188ORF20365P |
| 20370 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS2188ORF20365P |
| 20375 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2005 | cell division protein DamX | |||
| 2010 | M | M.StyTDamP (100% identity) | GATC | M.SenS2188DamP |
| 2015 | ribulose-phosphate 3-epimerase | |||
| 2500 | DUF2556 family protein | |||
| 2505 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS2188ORF2505P |
| 2510 | DNA-binding transcriptional regulator Fis | |||
| 9350 | PerC family transcriptional regulator | |||
| 9355 | M | M.StyUK1V (100% identity) | GATC | M.SenS2188ORF9355P |
| 9360 | RusA family crossover junction | |||
| 9595 | phosphohydrolase | |||
| 9600 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS2188DcmP |
| 9605 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS2188DcmP |
| 9610 | drug/metabolite exporter YedA | |||
| 20515 | BREX system P-loop protein BrxC | |||
| 20520 | RM | StyUK1IV (100% identity) | GATCAG | SenS2188ORF20520P |
| 20525 | AAA family ATPase | |||
| plasmid pN18S2188-1 | ||||
| 24045 | 120 aa hypothetical protein | |||
| 24050 | M | M.Vch11614ORFCP (100% identity) | M.SenS2188ORF24050P | |
| 24055 | IS66 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17790 | small effector SsaA | |||
| 17795 | R | StyUK1IP (99% identity) | CAGAG | SenS2188ORF17800P |
| 17800 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS2188ORF17800P |
| 17805 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20350 | BrnT family toxin | |||
| 20355 | R | StyUK1MrrP (100% identity) | SenS2188MrrP | |
| 20360 | type I restriction-modification system | |||