Salmonella enterica subsp. enterica serovar Typhimurium CVM N18S2170 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM N18S2170 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
Complete sequence: 4,994,305 bp
GenBank #: CP082526
REBASE acronym: SenS2170
Org_num: 55336
All begin FWW92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3260 | endoribonuclease SymE | |||
| 3265 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS2170ORF3270P |
| 3270 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS2170ORF3270P |
| 3275 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS2170ORF3270P |
| 3280 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3110 | AAA family ATPase | |||
| 3115 | RM | StyUK1IV (100% identity) | GATCAG | SenS2170ORF3115P |
| 3120 | BREX system P-loop protein BrxC | |||
| 5495 | 120 aa hypothetical protein | |||
| 5500 | M | M.Vch11614ORFCP (100% identity) | M.SenS2170ORF5500P | |
| 5505 | 143 aa hypothetical protein | |||
| 14600 | drug/metabolite exporter YedA | |||
| 14605 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS2170DcmP |
| 14610 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS2170DcmP |
| 14615 | phosphohydrolase | |||
| 21740 | DNA-binding transcriptional regulator Fis | |||
| 21745 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS2170ORF21745P |
| 21750 | DUF2556 family protein | |||
| 22235 | ribulose-phosphate 3-epimerase | |||
| 22240 | M | M.StyTDamP (100% identity) | GATC | M.SenS2170DamP |
| 22245 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6425 | MFS transporter | |||
| 6430 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS2170ORF6430P |
| 6435 | R | StyUK1IP (99% identity) | CAGAG | SenS2170ORF6430P |
| 6440 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3275 | type I restriction-modification system | |||
| 3280 | R | StyUK1MrrP (100% identity) | SenS2170MrrP | |
| 3285 | BrnT family toxin | |||