Salmonella enterica subsp. enterica serovar Typhimurium CVM N18S1677 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM N18S1677 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,954,884 bp | CP082543 |
| plasmid pN18S1677-1: | 156,149 bp | CP082545 |
| plasmid pN18S1677-2: | 5,676 bp | CP082544 |
REBASE acronym: SenS1677
Org_num: 55335
All begin GUE86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21085 | restriction endonuclease | |||
| 21090 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS1677ORF21095P |
| 21095 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS1677ORF21095P |
| 21100 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS1677ORF21095P |
| 21105 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2005 | cell division protein DamX | |||
| 2010 | M | M.StyTDamP (100% identity) | GATC | M.SenS1677DamP |
| 2015 | ribulose-phosphate 3-epimerase | |||
| 2530 | DUF2556 family protein | |||
| 2535 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS1677ORF2535P |
| 2540 | DNA-binding transcriptional regulator Fis | |||
| 9375 | PerC family transcriptional regulator | |||
| 9380 | M | M.StyUK1V (100% identity) | GATC | M.SenS1677ORF9380P |
| 9385 | RusA family crossover junction | |||
| 9620 | phosphohydrolase | |||
| 9625 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS1677DcmP |
| 9630 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS1677DcmP |
| 9635 | drug/metabolite exporter YedA | |||
| 21245 | BREX system P-loop protein BrxC | |||
| 21250 | RM | StyUK1IV (100% identity) | GATCAG | SenS1677ORF21250P |
| 21255 | AAA family ATPase | |||
| plasmid pN18S1677-1 | ||||
| 24670 | 143 aa hypothetical protein | |||
| 24675 | M | M.Vch11614ORFCP (100% identity) | M.SenS1677ORF24675P | |
| 24680 | 120 aa hypothetical protein | |||
| plasmid pN18S1677-2 | ||||
| 24360 | M | M.Sen17963IV (100% identity) | CCWWGG | M.SenS1677ORF24360P |
| 24365 | MbeD family mobilization/exclusion protein | |||
| 24370 | MbeB family mobilization protein | |||
| 24375 | relaxase/mobilization nuclease domain-containing | |||
| 24380 | MobC family plasmid mobilization relaxosome | |||
| 24385 | Rop family plasmid primer RNA-binding protein | |||
| 24390 | 90 aa hypothetical protein | |||
| 24355 | R | Sen17963IVP (100% identity) | CCWWGG | SenS1677ORF24360P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5910 | GTPase family protein | |||
| 5915 | M | M.SenXSKORFDP (100% identity) | CACCGT | M.SenS1677ORF5915P |
| 5920 | R | SenXSKORFDP (100% identity) | CACCGT | SenS1677ORF5915P |
| 5925 | inovirus Gp2 family protein | |||
| 18500 | small effector SsaA | |||
| 18505 | R | StyUK1IP (99% identity) | CAGAG | SenS1677ORF18510P |
| 18510 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS1677ORF18510P |
| 18515 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21080 | BrnT family toxin | |||
| 21085 | R | StyUK1MrrP (100% identity) | SenS1677MrrP | |
| 21090 | type I restriction-modification system | |||