Salmonella enterica subsp. enterica serovar Typhimurium CVM N18S0597 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium CVM N18S0597 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33765
Complete sequence: 4,996,846 bp
GenBank #: CP082681
REBASE acronym: SenS0597
Org_num: 55329
All begin FH362_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3260 | endoribonuclease SymE | |||
| 3265 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS0597ORF3270P |
| 3270 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS0597ORF3270P |
| 3275 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS0597ORF3270P |
| 3280 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3110 | AAA family ATPase | |||
| 3115 | RM | StyUK1IV (99% identity) | GATCAG | SenS0597ORF3115P |
| 3120 | BREX system P-loop protein BrxC | |||
| 5510 | 120 aa hypothetical protein | |||
| 5515 | M | M.Vch11614ORFCP (100% identity) | M.SenS0597ORF5515P | |
| 5520 | 143 aa hypothetical protein | |||
| 14615 | drug/metabolite exporter YedA | |||
| 14620 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS0597DcmP |
| 14625 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS0597DcmP |
| 14630 | phosphohydrolase | |||
| 21765 | DNA-binding transcriptional regulator Fis | |||
| 21770 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS0597ORF21770P |
| 21775 | DUF2556 family protein | |||
| 22260 | ribulose-phosphate 3-epimerase | |||
| 22265 | M | M.StyTDamP (100% identity) | GATC | M.SenS0597DamP |
| 22270 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6455 | MFS transporter | |||
| 6460 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS0597ORF6460P |
| 6465 | R | StyUK1IP (99% identity) | CAGAG | SenS0597ORF6460P |
| 6470 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3275 | type I restriction-modification system | |||
| 3280 | R | StyUK1MrrP (100% identity) | SenS0597MrrP | |
| 3285 | BrnT family toxin | |||