Salmonella enterica subsp. enterica serovar Newport CVM N17S1196 |
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Putative Salmonella enterica subsp. enterica serovar Newport CVM N17S1196 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
Complete sequence: 4,894,527 bp
GenBank #: CP082598
REBASE acronym: SenS1196
Org_num: 55295
All begin D7G51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20350 | 322 aa hypothetical protein | |||
| 20355 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | SenS1196ORF20360P |
| 20360 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.SenS1196ORF20360P |
| 20365 | S | S.SenS224ORF19910P (100% identity) | GACNNNNNNNRTCC | S.SenS1196ORF20360P |
| 20370 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1755 | cell division protein DamX | |||
| 1760 | M | M.StyTDamP (100% identity) | GATC | M.SenS1196DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS1196ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 5695 | DUF3850 domain-containing protein | |||
| 5700 | M | M.SenU1590ORF19885P (100% identity) | GATC | M.SenS1196ORF5700P |
| 5705 | replication endonuclease | |||
| 9430 | phosphohydrolase | |||
| 9435 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenS1196DcmP |
| 9440 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenS1196DcmP |
| 9445 | drug/metabolite exporter YedA | |||
| 14285 | methyltransferase | |||
| 14290 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.SenS1196ORF14290P |
| 14295 | 82 aa hypothetical protein | |||
| 20490 | YebC/PmpR family DNA-binding transcriptional | |||
| 20495 | R | SenS224ORF20045P (100% identity) | SenS1196ORF20495P | |
| 20500 | toprim domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18150 | small effector SsaA | |||
| 18155 | R | Ssp6947IIP (100% identity) | CAGAG | SenS1196ORF18160P |
| 18160 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.SenS1196ORF18160P |
| 18165 | MFS transporter | |||