Salmonella enterica subsp. enterica serovar Typhimurium FSIS1609224 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium FSIS1609224 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,933,400 bp | CP082429 |
| plasmid pF18S028: | 96,028 bp | CP082430 |
REBASE acronym: Sen9224
Org_num: 55343
All begin BV576_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20405 | restriction endonuclease | |||
| 20410 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen9224ORF20415P |
| 20415 | M | M.StyLTIII (99% identity) | GAGNNNNNNRTAYG | M.Sen9224ORF20415P |
| 20420 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen9224ORF20415P |
| 20425 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen9224DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen9224ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 9240 | PerC family transcriptional regulator | |||
| 9245 | M | M.StyUK1V (99% identity) | GATC | M.Sen9224ORF9245P |
| 9250 | RusA family crossover junction | |||
| 9485 | phosphohydrolase | |||
| 9490 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen9224DcmP |
| 9495 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen9224DcmP |
| 9500 | drug/metabolite exporter YedA | |||
| 20565 | BREX system P-loop protein BrxC | |||
| 20570 | RM | StyUK1IV (100% identity) | GATCAG | Sen9224ORF20570P |
| 20575 | AAA family ATPase | |||
| plasmid pF18S028 | ||||
| 24625 | 118 aa hypothetical protein | |||
| 24630 | M | M.StyUK1ORFAP (100% identity) | M.Sen9224ORF24630P | |
| 24635 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17900 | small effector SsaA | |||
| 17905 | R | StyUK1IP (99% identity) | CAGAG | Sen9224ORF17910P |
| 17910 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen9224ORF17910P |
| 17915 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20400 | BrnT family toxin | |||
| 20405 | R | StyUK1MrrP (100% identity) | Sen9224MrrP | |
| 20410 | type I restriction-modification system | |||