Salmonella enterica subsp. enterica serovar Typhimurium FSIS1607455 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium FSIS1607455 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,982,000 bp | CP082468 |
| plasmid pF18S013-1: | 388,732 bp | CP082469 |
REBASE acronym: Sen7455
Org_num: 55342
All begin BGP52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20905 | restriction endonuclease | |||
| 20910 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen7455ORF20915P |
| 20915 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen7455ORF20915P |
| 20920 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen7455ORF20915P |
| 20925 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen7455DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen7455ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 6340 | Com family DNA-binding transcriptional | |||
| 6345 | M | M.SenYU39ORF1896P (100% identity) | M.Sen7455ORF6345P | |
| 6350 | ribosome-associated translation inhibitor RaiA | |||
| 9135 | DUF4060 family protein | |||
| 9140 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.Sen7455ORF9140P |
| 9145 | YqaJ viral recombinase family protein | |||
| 9845 | phosphohydrolase | |||
| 9850 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen7455DcmP |
| 9855 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen7455DcmP |
| 9860 | drug/metabolite exporter YedA | |||
| 13990 | ATP-binding protein | |||
| 13995 | M | M.SenSH7ORF6615P (100% identity) | M.Sen7455ORF13995P | |
| 14000 | Eaa protein | |||
| 15840 | 73 aa hypothetical protein | |||
| 15845 | M | M.StyR64ORFAP (100% identity) | M.Sen7455ORF15845P | |
| 15850 | 103 aa hypothetical protein | |||
| 21065 | BREX system P-loop protein BrxC | |||
| 21070 | RM | StyUK1IV (100% identity) | GATCAG | Sen7455ORF21070P |
| 21075 | AAA family ATPase | |||
| plasmid pF18S013-1 | ||||
| 25215 | 143 aa hypothetical protein | |||
| 25220 | M | M.Vch11614ORFCP (100% identity) | M.Sen7455ORF25220P | |
| 25225 | 120 aa hypothetical protein | |||
| 25710 | IS66 family transposase | |||
| 25715 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen7455ORF25715P |
| 25720 | DNA-binding protein | |||
| 25825 | 202 aa hypothetical protein | |||
| 25830 | M | M.YpsF1ORFBP (100% identity) | M.Sen7455ORF25830P | |
| 25835 | 48 aa hypothetical protein | |||
| 26240 | thermonuclease family protein | |||
| 26245 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen7455ORF26245P |
| 26250 | 55 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5675 | GTPase family protein | |||
| 5680 | M | M.SenXSKORFDP (100% identity) | CACCGT | M.Sen7455ORF5680P |
| 5685 | R | SenXSKORFDP (100% identity) | CACCGT | Sen7455ORF5680P |
| 5690 | inovirus Gp2 family protein | |||
| 18715 | small effector SsaA | |||
| 18720 | R | StyUK1IP (99% identity) | CAGAG | Sen7455ORF18725P |
| 18725 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen7455ORF18725P |
| 18730 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20900 | BrnT family toxin | |||
| 20905 | R | StyUK1MrrP (100% identity) | Sen7455MrrP | |
| 20910 | type I restriction-modification system | |||