Salmonella enterica subsp. enterica serovar Muenster FSIS1607861 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Muenster FSIS1607861 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
Complete sequence: 4,745,625 bp
GenBank #: CP082453
REBASE acronym: Sen82453
Org_num: 55292
All begin BKZ44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19680 | toll/interleukin-1 receptor domain-containing | |||
| 19685 | M | M.SenS708ORF17810P (100% identity) | TAAGNNNNNTTC | M.Sen82453ORF19685P |
| 19690 | S | S.SenS708ORF17810P (100% identity) | TAAGNNNNNTTC | S.Sen82453ORF19685P |
| 19695 | R | SenS708ORF17810P (100% identity) | TAAGNNNNNTTC | Sen82453ORF19685P |
| 19700 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1745 | cell division protein DamX | |||
| 1750 | M | M.StyTDamP (100% identity) | GATC | M.Sen82453DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen82453ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 5405 | TraR/DksA family transcriptional regulator | |||
| 5410 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.Sen82453ORF5410P |
| 5415 | replication endonuclease | |||
| 9450 | phosphohydrolase | |||
| 9455 | M | M.SenS688DcmP (100% identity) | CCWGG | M.Sen82453DcmP |
| 9460 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen82453DcmP |
| 9465 | drug/metabolite exporter YedA | |||
| 19555 | DeoR family transcriptional regulator | |||
| 19560 | R | Sen34526ORF3305P (100% identity) | Sen82453ORF19565P | |
| 19565 | M | M.SenS708ORF17695P (100% identity) | M.Sen82453ORF19565P | |
| 19570 | ATP-binding protein | |||
| 19720 | 69 aa hypothetical protein | |||
| 19725 | R | SenRM074ORF19845P (100% identity) | GAAC | Sen82453ORF19725P |
| 19730 | integrase arm-type DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17305 | small effector SsaA | |||
| 17310 | R | Sens30601ORF17060P (100% identity) | CAGAG | Sen82453ORF17315P |
| 17315 | M | M.SenRM074ORF17420P (100% identity) | CAGAG | M.Sen82453ORF17315P |
| 17320 | MFS transporter | |||